This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5jnm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:59, 20 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5jnm' size='340' side='right'caption='[[5jnm]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='5jnm' size='340' side='right'caption='[[5jnm]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5jnm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staa1 Staa1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JNM OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5JNM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5jnm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_Mu3 Staphylococcus aureus subsp. aureus Mu3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JNM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JNM FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.701&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mtlD, SAHV_2143 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=418127 STAA1])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jnm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jnm OCA], [https://pdbe.org/5jnm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jnm RCSB], [https://www.ebi.ac.uk/pdbsum/5jnm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jnm ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannitol-1-phosphate_5-dehydrogenase Mannitol-1-phosphate 5-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.17 1.1.1.17] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5jnm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jnm OCA], [http://pdbe.org/5jnm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jnm RCSB], [http://www.ebi.ac.uk/pdbsum/5jnm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jnm ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MTLD_STAA1 MTLD_STAA1]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Mannitol-1-phosphate 5-dehydrogenase]]
+
[[Category: Staphylococcus aureus subsp. aureus Mu3]]
-
[[Category: Staa1]]
+
[[Category: Kim KK]]
-
[[Category: Kim, K K]]
+
[[Category: Kim T]]
-
[[Category: Kim, T]]
+
[[Category: Nguyen T]]
-
[[Category: Nguyen, T]]
+
[[Category: Ta HM]]
-
[[Category: Ta, H M]]
+
-
[[Category: Mannitol-1-phosphate fructose-6-phosphate nad dehydrogenase]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Crystal structure of MtlD from Staphylococcus aureus at 1.7-Angstrom resolution

PDB ID 5jnm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools