This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5jns

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:00, 20 September 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of human low molecular weight protein tyrosine phosphatase (LMPTP) type A complexed with phosphate==
==Crystal structure of human low molecular weight protein tyrosine phosphatase (LMPTP) type A complexed with phosphate==
-
<StructureSection load='5jns' size='340' side='right' caption='[[5jns]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='5jns' size='340' side='right'caption='[[5jns]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5jns]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JNS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JNS FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5jns]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JNS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JNS FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5jnt|5jnt]], [[5jnr|5jnr]], [[5jnv|5jnv]], [[5jnu|5jnu]], [[5jnw|5jnw]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-tyrosine-phosphatase Protein-tyrosine-phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.48 3.1.3.48] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jns FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jns OCA], [https://pdbe.org/5jns PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jns RCSB], [https://www.ebi.ac.uk/pdbsum/5jns PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jns ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jns FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jns OCA], [http://pdbe.org/5jns PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jns RCSB], [http://www.ebi.ac.uk/pdbsum/5jns PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jns ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PPAC_HUMAN PPAC_HUMAN]] Acts on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates. Isoform 3 does not possess phosphatase activity.
+
[https://www.uniprot.org/uniprot/PPAC_HUMAN PPAC_HUMAN] Acts on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates. Isoform 3 does not possess phosphatase activity.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Protein-tyrosine-phosphatase]]
+
[[Category: Homo sapiens]]
-
[[Category: Aleshin, A E]]
+
[[Category: Large Structures]]
-
[[Category: Bankston, L]]
+
[[Category: Aleshin AE]]
-
[[Category: Bottini, N]]
+
[[Category: Bankston L]]
-
[[Category: Cadwell, G]]
+
[[Category: Bottini N]]
-
[[Category: Liddington, R C]]
+
[[Category: Cadwell G]]
-
[[Category: Stanford, S M]]
+
[[Category: Liddington RC]]
-
[[Category: Hydrolase]]
+
[[Category: Stanford SM]]
-
[[Category: Lmptp]]
+
-
[[Category: Lmw-ptp]]
+
-
[[Category: Protein tyrosine phosphatase]]
+

Current revision

Crystal structure of human low molecular weight protein tyrosine phosphatase (LMPTP) type A complexed with phosphate

PDB ID 5jns

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools