This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5k05

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:16, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal Structure of COMT in complex with 4-methyl-2-(4-methylphenyl)-5-(1H-pyrazol-5-yl)-1,3-thiazole==
==Crystal Structure of COMT in complex with 4-methyl-2-(4-methylphenyl)-5-(1H-pyrazol-5-yl)-1,3-thiazole==
-
<StructureSection load='5k05' size='340' side='right' caption='[[5k05]], [[Resolution|resolution]] 2.14&Aring;' scene=''>
+
<StructureSection load='5k05' size='340' side='right'caption='[[5k05]], [[Resolution|resolution]] 2.14&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5k05]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5K05 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5K05 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5k05]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5K05 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5K05 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6P5:4-METHYL-2-(4-METHYLPHENYL)-5-(1H-PYRAZOL-5-YL)-1,3-THIAZOLE'>6P5</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.14&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Catechol_O-methyltransferase Catechol O-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.6 2.1.1.6] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6P5:4-METHYL-2-(4-METHYLPHENYL)-5-(1H-PYRAZOL-5-YL)-1,3-THIAZOLE'>6P5</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5k05 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5k05 OCA], [http://pdbe.org/5k05 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5k05 RCSB], [http://www.ebi.ac.uk/pdbsum/5k05 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5k05 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5k05 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5k05 OCA], [https://pdbe.org/5k05 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5k05 RCSB], [https://www.ebi.ac.uk/pdbsum/5k05 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5k05 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/COMT_RAT COMT_RAT]] Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones. Also shortens the biological half-lives of certain neuroactive drugs, like L-DOPA, alpha-methyl DOPA and isoproterenol.
+
[https://www.uniprot.org/uniprot/COMT_RAT COMT_RAT] Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones. Also shortens the biological half-lives of certain neuroactive drugs, like L-DOPA, alpha-methyl DOPA and isoproterenol.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 5k05" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5k05" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Catechol O-methyltransferase 3D structures|Catechol O-methyltransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Catechol O-methyltransferase]]
+
[[Category: Large Structures]]
-
[[Category: Ehler, A]]
+
[[Category: Rattus norvegicus]]
-
[[Category: RODRIGUEZ-SARMIENTO, R M]]
+
[[Category: Ehler A]]
-
[[Category: Rudolph, M G]]
+
[[Category: Rodriguez-Sarmiento RM]]
-
[[Category: Catechol]]
+
[[Category: Rudolph MG]]
-
[[Category: Methyltransferase]]
+
-
[[Category: Neurotransmitter degradation]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal Structure of COMT in complex with 4-methyl-2-(4-methylphenyl)-5-(1H-pyrazol-5-yl)-1,3-thiazole

PDB ID 5k05

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools