This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4tt6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:22, 27 September 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of ATAD2A bromodomain double mutant N1063A-Y1064A in apo form==
==Crystal structure of ATAD2A bromodomain double mutant N1063A-Y1064A in apo form==
-
<StructureSection load='4tt6' size='340' side='right' caption='[[4tt6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='4tt6' size='340' side='right'caption='[[4tt6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4tt6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TT6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4TT6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4tt6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TT6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4TT6 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4tt2|4tt2]], [[4tt4|4tt4]], [[4tte|4tte]], [[4tu4|4tu4]], [[4tu6|4tu6]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenosinetriphosphatase Adenosinetriphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.3 3.6.1.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4tt6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tt6 OCA], [https://pdbe.org/4tt6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4tt6 RCSB], [https://www.ebi.ac.uk/pdbsum/4tt6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4tt6 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4tt6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tt6 OCA], [http://pdbe.org/4tt6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4tt6 RCSB], [http://www.ebi.ac.uk/pdbsum/4tt6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4tt6 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ATAD2_HUMAN ATAD2_HUMAN]] May be a transcriptional coactivator of the nuclear receptor ESR1 required to induce the expression of a subset of estradiol target genes, such as CCND1, MYC and E2F1. May play a role in the recruitment or occupancy of CREBBP at some ESR1 target gene promoters. May be required for histone hyperacetylation. Involved in the estrogen-induced cell proliferation and cell cycle progression of breast cancer cells.<ref>PMID:17998543</ref>
+
[https://www.uniprot.org/uniprot/ATAD2_HUMAN ATAD2_HUMAN] May be a transcriptional coactivator of the nuclear receptor ESR1 required to induce the expression of a subset of estradiol target genes, such as CCND1, MYC and E2F1. May play a role in the recruitment or occupancy of CREBBP at some ESR1 target gene promoters. May be required for histone hyperacetylation. Involved in the estrogen-induced cell proliferation and cell cycle progression of breast cancer cells.<ref>PMID:17998543</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 19:
</div>
</div>
<div class="pdbe-citations 4tt6" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4tt6" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[ATPase family AAA domain-containing protein|ATPase family AAA domain-containing protein]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Adenosinetriphosphatase]]
+
[[Category: Homo sapiens]]
-
[[Category: Andersen, J]]
+
[[Category: Large Structures]]
-
[[Category: Bardenhagen, J]]
+
[[Category: Andersen J]]
-
[[Category: Cardozo, M]]
+
[[Category: Bardenhagen J]]
-
[[Category: Do, M Geck]]
+
[[Category: Cardozo M]]
-
[[Category: Jones, P]]
+
[[Category: Geck Do M]]
-
[[Category: Ladbury, J]]
+
[[Category: Jones P]]
-
[[Category: Lee, G]]
+
[[Category: Ladbury J]]
-
[[Category: Leo, E]]
+
[[Category: Lee G]]
-
[[Category: Leonard, P]]
+
[[Category: Leo E]]
-
[[Category: Palmer, W]]
+
[[Category: Leonard P]]
-
[[Category: Petrocchi, A]]
+
[[Category: Palmer W]]
-
[[Category: Poncet-Montange, G]]
+
[[Category: Petrocchi A]]
-
[[Category: Shi, X]]
+
[[Category: Poncet-Montange G]]
-
[[Category: Zhan, Y]]
+
[[Category: Shi X]]
-
[[Category: Acetyllysine reader deficient bromodomain]]
+
[[Category: Zhan Y]]
-
[[Category: Gene regulation]]
+

Current revision

Crystal structure of ATAD2A bromodomain double mutant N1063A-Y1064A in apo form

PDB ID 4tt6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools