This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4txm
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==Crystal structure of uridine phosphorylase from Schistosoma mansoni in complex with thymine== | ==Crystal structure of uridine phosphorylase from Schistosoma mansoni in complex with thymine== | ||
| - | <StructureSection load='4txm' size='340' side='right' caption='[[4txm]], [[Resolution|resolution]] 1.93Å' scene=''> | + | <StructureSection load='4txm' size='340' side='right'caption='[[4txm]], [[Resolution|resolution]] 1.93Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4txm]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TXM OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[4txm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Schistosoma_mansoni Schistosoma mansoni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TXM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4TXM FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TDR:THYMINE'>TDR</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4txm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4txm OCA], [https://pdbe.org/4txm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4txm RCSB], [https://www.ebi.ac.uk/pdbsum/4txm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4txm ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/UPPA_SCHMA UPPA_SCHMA] Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate (PubMed:26898674). The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis (Probable).<ref>PMID:26898674</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 18: | Line 19: | ||
</div> | </div> | ||
<div class="pdbe-citations 4txm" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 4txm" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Uridine phosphorylase 3D structures|Uridine phosphorylase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Brandao-Neto | + | [[Category: Schistosoma mansoni]] |
| - | [[Category: Cassago | + | [[Category: Brandao-Neto J]] |
| - | [[Category: DeMarco | + | [[Category: Cassago A]] |
| - | [[Category: Marinho | + | [[Category: DeMarco R]] |
| - | [[Category: Pereira | + | [[Category: Marinho A]] |
| - | [[Category: Romanello | + | [[Category: Pereira HM]] |
| - | [[Category: Torini | + | [[Category: Romanello L]] |
| - | + | [[Category: Torini J]] | |
Current revision
Crystal structure of uridine phosphorylase from Schistosoma mansoni in complex with thymine
| |||||||||||
