This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4x04

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:39, 27 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899, TARGET EFI-510094) WITH BOUND D-glucuronate==
==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899, TARGET EFI-510094) WITH BOUND D-glucuronate==
-
<StructureSection load='4x04' size='340' side='right' caption='[[4x04]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='4x04' size='340' side='right'caption='[[4x04]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4x04]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Citk8 Citk8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X04 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4X04 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4x04]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Citrobacter_koseri_ATCC_BAA-895 Citrobacter koseri ATCC BAA-895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X04 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4X04 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CKO_04899 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=290338 CITK8])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4x04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x04 OCA], [https://pdbe.org/4x04 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4x04 RCSB], [https://www.ebi.ac.uk/pdbsum/4x04 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4x04 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4x04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x04 OCA], [http://pdbe.org/4x04 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4x04 RCSB], [http://www.ebi.ac.uk/pdbsum/4x04 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4x04 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A8AR30_CITK8 A8AR30_CITK8]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Citk8]]
+
[[Category: Citrobacter koseri ATCC BAA-895]]
-
[[Category: Almo, S C]]
+
[[Category: Large Structures]]
-
[[Category: Attonito, J D]]
+
[[Category: Al Obaidi NF]]
-
[[Category: Benach, J]]
+
[[Category: Almo SC]]
-
[[Category: Chamala, S]]
+
[[Category: Attonito JD]]
-
[[Category: Chowdhury, S]]
+
[[Category: Benach J]]
-
[[Category: EFI, Enzyme Function Initiative]]
+
[[Category: Chamala S]]
-
[[Category: Gerlt, J A]]
+
[[Category: Chowdhury S]]
-
[[Category: Glenn, A Scott]]
+
[[Category: Gerlt JA]]
-
[[Category: Lafleur, J]]
+
[[Category: Lafleur J]]
-
[[Category: Love, J]]
+
[[Category: Love J]]
-
[[Category: Morisco, L L]]
+
[[Category: Morisco LL]]
-
[[Category: Obaidi, N F.Al]]
+
[[Category: Scott Glenn A]]
-
[[Category: Seidel, R D]]
+
[[Category: Seidel RD]]
-
[[Category: Toro, R]]
+
[[Category: Toro R]]
-
[[Category: Vetting, M W]]
+
[[Category: Vetting MW]]
-
[[Category: Wasserman, S R]]
+
[[Category: Wasserman SR]]
-
[[Category: Whalen, K L]]
+
[[Category: Whalen KL]]
-
[[Category: Yadava, U]]
+
[[Category: Yadava U]]
-
[[Category: Efi]]
+
-
[[Category: Enzyme function initiative]]
+
-
[[Category: Solute binding protein]]
+
-
[[Category: Structural genomic]]
+

Current revision

CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899, TARGET EFI-510094) WITH BOUND D-glucuronate

PDB ID 4x04

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools