4zj0

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==The crystal structure of monomer Q108K:K40L:Y60W CRBPII bound to all-trans-retinal==
==The crystal structure of monomer Q108K:K40L:Y60W CRBPII bound to all-trans-retinal==
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<StructureSection load='4zj0' size='340' side='right' caption='[[4zj0]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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<StructureSection load='4zj0' size='340' side='right'caption='[[4zj0]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4zj0]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZJ0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZJ0 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4zj0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZJ0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZJ0 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zj0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zj0 OCA], [http://pdbe.org/4zj0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zj0 RCSB], [http://www.ebi.ac.uk/pdbsum/4zj0 PDBsum]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zj0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zj0 OCA], [https://pdbe.org/4zj0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zj0 RCSB], [https://www.ebi.ac.uk/pdbsum/4zj0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zj0 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/RET2_HUMAN RET2_HUMAN]] Intracellular transport of retinol.
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[https://www.uniprot.org/uniprot/RET2_HUMAN RET2_HUMAN] Intracellular transport of retinol.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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Cellular retinol-binding proteins (CRBPs) I and II, which are members of the intracellular lipid-binding protein (iLBP) family, are retinoid chaperones that are responsible for the intracellular transport and delivery of both retinol and retinal. Although structures of retinol-bound CRBPI and CRBPII are known, no structure of a retinal-bound CRBP has been reported. In addition, the retinol-bound human CRBPII (hCRBPII) structure shows partial occupancy of a noncanonical conformation of retinol in the binding pocket. Here, the structure of retinal-bound hCRBPII and the structure of retinol-bound hCRBPII with retinol fully occupying the binding pocket are reported. It is further shown that the retinoid derivative seen in both the zebrafish CRBP and the hCRBPII structures is likely to be the product of flux-dependent and wavelength-dependent X-ray damage during data collection. The structures of retinoid-bound CRBPs are compared and contrasted, and rationales for the differences in binding affinities for retinal and retinol are provided.
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Human Cellular Retinol Binding Protein II (hCRBPII), a member of the intracellular lipid-binding protein family, is a monomeric protein responsible for the intracellular transport of retinol and retinal. Herein we report that hCRBPII forms an extensive domain-swapped dimer during bacterial expression. The domain-swapped region encompasses almost half of the protein. The dimer represents a novel structural architecture with the mouths of the two binding cavities facing each other, producing a new binding cavity that spans the length of the protein complex. Although wild-type hCRBPII forms the dimer, the propensity for dimerization can be substantially increased via mutation at Tyr60. The monomeric form of the wild-type protein represents the thermodynamically more stable species, making the domain-swapped dimer a kinetically trapped entity. Hypothetically, the wild-type protein has evolved to minimize dimerization of the folding intermediate through a critical hydrogen bond (Tyr60-Glu72) that disfavors the dimeric form.
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Structures of holo wild-type human cellular retinol-binding protein II (hCRBPII) bound to retinol and retinal.,Nossoni Z, Assar Z, Yapici I, Nosrati M, Wang W, Berbasova T, Vasileiou C, Borhan B, Geiger J Acta Crystallogr D Biol Crystallogr. 2014 Dec 1;70(Pt 12):3226-32. doi:, 10.1107/S1399004714023839. Epub 2014 Nov 22. PMID:25478840<ref>PMID:25478840</ref>
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Domain-Swapped Dimers of Intracellular Lipid-Binding Proteins: Evidence for Ordered Folding Intermediates.,Assar Z, Nossoni Z, Wang W, Santos EM, Kramer K, McCornack C, Vasileiou C, Borhan B, Geiger JH Structure. 2016 Sep 6;24(9):1590-8. doi: 10.1016/j.str.2016.05.022. Epub 2016 Aug, 11. PMID:27524203<ref>PMID:27524203</ref>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 4zj0" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4zj0" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Retinol-binding protein 3D structures|Retinol-binding protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Assar, Z]]
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[[Category: Homo sapiens]]
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[[Category: Borhan, B]]
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[[Category: Large Structures]]
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[[Category: Geiger, J H]]
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[[Category: Assar Z]]
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[[Category: Nossoni, Z]]
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[[Category: Borhan B]]
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[[Category: Vasileiou, C]]
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[[Category: Geiger JH]]
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[[Category: Wang, W]]
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[[Category: Nossoni Z]]
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[[Category: Domain swapping dimer]]
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[[Category: Vasileiou C]]
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[[Category: Transport protein]]
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[[Category: Wang W]]

Current revision

The crystal structure of monomer Q108K:K40L:Y60W CRBPII bound to all-trans-retinal

PDB ID 4zj0

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