4zlu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:20, 27 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Lipomyces starkeyi levoglucosan kinase bound to levoglucosan, ADP and magnesium.==
==Lipomyces starkeyi levoglucosan kinase bound to levoglucosan, ADP and magnesium.==
-
<StructureSection load='4zlu' size='340' side='right' caption='[[4zlu]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='4zlu' size='340' side='right'caption='[[4zlu]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4zlu]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZLU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZLU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4zlu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lipomyces_starkeyi Lipomyces starkeyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZLU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZLU FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4PW:LEVOGLUCOSAN'>4PW</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4yh5|4yh5]], [[4zfv|4zfv]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4PW:LEVOGLUCOSAN'>4PW</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zlu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zlu OCA], [http://pdbe.org/4zlu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zlu RCSB], [http://www.ebi.ac.uk/pdbsum/4zlu PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zlu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zlu OCA], [https://pdbe.org/4zlu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zlu RCSB], [https://www.ebi.ac.uk/pdbsum/4zlu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zlu ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LGK_LIPST LGK_LIPST] Levoglucosan kinase that catalyzes the transfer of a phosphate group from ATP to levoglucosan (1,6-anhydro-beta-D-glucopyranose, LG) to yield glucose 6-phosphate in the presence of magnesium ion and ATP (Ref.1, PubMed:21719279, PubMed:26354439). In addition to the canonical kinase phosphotransfer reaction, the conversion requires cleavage of the 1,6-anhydro ring to allow ATP-dependent phosphorylation of the sugar O-6 atom (Ref.1, PubMed:21719279, PubMed:26354439).<ref>PMID:21719279</ref> <ref>PMID:26354439</ref> <ref>PMID:21719279</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacik, J P]]
+
[[Category: Large Structures]]
-
[[Category: Atp-binding]]
+
[[Category: Lipomyces starkeyi]]
-
[[Category: Carbohydrate metabolism]]
+
[[Category: Bacik JP]]
-
[[Category: Sugar kinase]]
+
-
[[Category: Transferase]]
+

Current revision

Lipomyces starkeyi levoglucosan kinase bound to levoglucosan, ADP and magnesium.

PDB ID 4zlu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools