This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4zoj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:21, 27 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4zoj' size='340' side='right'caption='[[4zoj]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
<StructureSection load='4zoj' size='340' side='right'caption='[[4zoj]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4zoj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycta Mycta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZOJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZOJ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4zoj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Ra Mycobacterium tuberculosis H37Ra]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZOJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZOJ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=61L:4-METHYL-2-{[2-METHYL-6-(METHYLSULFANYL)PHENYL]AMINO}BENZOIC+ACID'>61L</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PRP:ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC+ACID'>PRP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.96&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4giu|4giu]], [[3qr9|3qr9]], [[4zof|4zof]], [[4zok|4zok]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=61L:4-METHYL-2-{[2-METHYL-6-(METHYLSULFANYL)PHENYL]AMINO}BENZOIC+ACID'>61L</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PRP:ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC+ACID'>PRP</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">trpD, MRA_2208 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=419947 MYCTA])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zoj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zoj OCA], [https://pdbe.org/4zoj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zoj RCSB], [https://www.ebi.ac.uk/pdbsum/4zoj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zoj ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Anthranilate_phosphoribosyltransferase Anthranilate phosphoribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.18 2.4.2.18] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zoj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zoj OCA], [http://pdbe.org/4zoj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zoj RCSB], [http://www.ebi.ac.uk/pdbsum/4zoj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4zoj ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TRPD_MYCTA TRPD_MYCTA]] Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).
+
[https://www.uniprot.org/uniprot/TRPD_MYCTA TRPD_MYCTA] Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).
==See Also==
==See Also==
Line 17: Line 15:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Anthranilate phosphoribosyltransferase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Mycta]]
+
[[Category: Mycobacterium tuberculosis H37Ra]]
-
[[Category: Baker, E N]]
+
[[Category: Baker EN]]
-
[[Category: Evans, G L]]
+
[[Category: Evans GL]]
-
[[Category: Lott, J S]]
+
[[Category: Lott JS]]
-
[[Category: Structural genomic]]
+
-
[[Category: Complex]]
+
-
[[Category: Inhibitor]]
+
-
[[Category: Lobenzarit-like analogue]]
+
-
[[Category: Magnesium binding]]
+
-
[[Category: Phosphoribosylpyrophosphate]]
+
-
[[Category: Phosphoribosyltransferase]]
+
-
[[Category: Prpp]]
+
-
[[Category: Tbsgc]]
+
-
[[Category: Transferase-transferase inhibitor complex]]
+

Current revision

Methylsulfanyl-containing inhibitor bound in the active site of Mycobacterium tuberculosis anthranilate phosphoribosyltransferase (AnPRT; trpD)

PDB ID 4zoj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools