This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5km8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:03, 27 September 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Human Histidine Triad Nucleotide Binding Protein 2 (hHint2) Cidofovir complex==
==Human Histidine Triad Nucleotide Binding Protein 2 (hHint2) Cidofovir complex==
-
<StructureSection load='5km8' size='340' side='right' caption='[[5km8]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='5km8' size='340' side='right'caption='[[5km8]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5km8]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KM8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KM8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5km8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KM8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KM8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=L8P:({[(2S)-1-(4-AMINO-2-OXOPYRIMIDIN-1(2H)-YL)-3-HYDROXYPROPAN-2-YL]OXY}METHYL)PHOSPHONIC+ACID'>L8P</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3tw2|3tw2]], [[5ipb|5ipb]], [[5ipc|5ipc]], [[5ipd|5ipd]], [[5ipe|5ipe]], [[5kly|5kly]], [[5klz|5klz]], [[5km0|5km0]], [[5km1|5km1]], [[5km2|5km2]], [[5km3|5km3]], [[5km4|5km4]], [[5km5|5km5]], [[5km6|5km6]], [[5km7|5km7]], [[5km9|5km9]], [[5kma|5kma]], [[5kmb|5kmb]], [[5kmc|5kmc]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=L8P:({[(2S)-1-(4-AMINO-2-OXOPYRIMIDIN-1(2H)-YL)-3-HYDROXYPROPAN-2-YL]OXY}METHYL)PHOSPHONIC+ACID'>L8P</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5km8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5km8 OCA], [http://pdbe.org/5km8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5km8 RCSB], [http://www.ebi.ac.uk/pdbsum/5km8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5km8 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5km8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5km8 OCA], [https://pdbe.org/5km8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5km8 RCSB], [https://www.ebi.ac.uk/pdbsum/5km8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5km8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/HINT2_HUMAN HINT2_HUMAN]] Hydrolase probably involved in steroid biosynthesis. May play a role in apoptosis. Has adenosine phosphoramidase activity.<ref>PMID:16762638</ref> <ref>PMID:18653718</ref>
+
[https://www.uniprot.org/uniprot/HINT2_HUMAN HINT2_HUMAN] Hydrolase probably involved in steroid biosynthesis. May play a role in apoptosis. Has adenosine phosphoramidase activity.<ref>PMID:16762638</ref> <ref>PMID:18653718</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 5km8" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5km8" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Histidine triad nucleotide-binding protein 3D structures|Histidine triad nucleotide-binding protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Finzel, B C]]
+
[[Category: Homo sapiens]]
-
[[Category: Maize, K M]]
+
[[Category: Large Structures]]
-
[[Category: Hint]]
+
[[Category: Finzel BC]]
-
[[Category: Histidine triad]]
+
[[Category: Maize KM]]
-
[[Category: Hit]]
+
-
[[Category: Hydrolase]]
+

Current revision

Human Histidine Triad Nucleotide Binding Protein 2 (hHint2) Cidofovir complex

PDB ID 5km8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools