This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5k59

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:39, 27 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of LukGH from Staphylococcus aureus in complex with a neutralising antibody==
==Crystal structure of LukGH from Staphylococcus aureus in complex with a neutralising antibody==
-
<StructureSection load='5k59' size='340' side='right' caption='[[5k59]], [[Resolution|resolution]] 2.84&Aring;' scene=''>
+
<StructureSection load='5k59' size='340' side='right'caption='[[5k59]], [[Resolution|resolution]] 2.84&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5k59]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5K59 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5K59 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5k59]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_USA300 Staphylococcus aureus subsp. aureus USA300]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5K59 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5K59 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.84&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4tw1|4tw1]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5k59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5k59 OCA], [http://pdbe.org/5k59 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5k59 RCSB], [http://www.ebi.ac.uk/pdbsum/5k59 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5k59 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5k59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5k59 OCA], [https://pdbe.org/5k59 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5k59 RCSB], [https://www.ebi.ac.uk/pdbsum/5k59 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5k59 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LUKL1_STAA8 LUKL1_STAA8]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Badarau, A]]
+
[[Category: Homo sapiens]]
-
[[Category: Dolezilkova, I]]
+
[[Category: Large Structures]]
-
[[Category: Logan, D T]]
+
[[Category: Staphylococcus aureus subsp. aureus USA300]]
-
[[Category: Mirkina, I]]
+
[[Category: Badarau A]]
-
[[Category: Nagy, E]]
+
[[Category: Dolezilkova I]]
-
[[Category: Welin, M]]
+
[[Category: Logan DT]]
-
[[Category: Zauner, G]]
+
[[Category: Mirkina I]]
-
[[Category: Conformational epitope]]
+
[[Category: Nagy E]]
-
[[Category: Immune system]]
+
[[Category: Welin M]]
-
[[Category: Toxin neutralizing monoclonal antibody]]
+
[[Category: Zauner G]]
-
[[Category: X-ray crystal structure]]
+

Current revision

Crystal structure of LukGH from Staphylococcus aureus in complex with a neutralising antibody

PDB ID 5k59

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools