This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5ksp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:53, 27 September 2023) (edit) (undo)
 
Line 1: Line 1:
==hMiro1 C-domain GDP Complex C2221 Crystal Form==
==hMiro1 C-domain GDP Complex C2221 Crystal Form==
-
<StructureSection load='5ksp' size='340' side='right' caption='[[5ksp]], [[Resolution|resolution]] 2.16&Aring;' scene=''>
+
<StructureSection load='5ksp' size='340' side='right'caption='[[5ksp]], [[Resolution|resolution]] 2.16&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ksp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KSP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KSP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ksp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KSP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KSP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.162&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5kso|5kso]], [[5ksy|5ksy]], [[5ksz|5ksz]], [[5kty|5kty]], [[5ku1|5ku1]], [[5kut|5kut]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RHOT1, ARHT1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ksp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ksp OCA], [https://pdbe.org/5ksp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ksp RCSB], [https://www.ebi.ac.uk/pdbsum/5ksp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ksp ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ksp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ksp OCA], [http://pdbe.org/5ksp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ksp RCSB], [http://www.ebi.ac.uk/pdbsum/5ksp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ksp ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/MIRO1_HUMAN MIRO1_HUMAN]] Mitochondrial GTPase involved in mitochondrial trafficking. Probably involved in control of anterograde transport of mitochondria and their subcellular distribution.<ref>PMID:12482879</ref> <ref>PMID:16630562</ref>
+
[https://www.uniprot.org/uniprot/MIRO1_HUMAN MIRO1_HUMAN] Mitochondrial GTPase involved in mitochondrial trafficking. Probably involved in control of anterograde transport of mitochondria and their subcellular distribution.<ref>PMID:12482879</ref> <ref>PMID:16630562</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 19:
</div>
</div>
<div class="pdbe-citations 5ksp" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5ksp" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Rho GTPase 3D structures|Rho GTPase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
-
[[Category: Focia, P J]]
+
[[Category: Large Structures]]
-
[[Category: Freymann, D M]]
+
[[Category: Focia PJ]]
-
[[Category: Klosowiak, J L]]
+
[[Category: Freymann DM]]
-
[[Category: Rice, S E]]
+
[[Category: Klosowiak JL]]
-
[[Category: Gtpase]]
+
[[Category: Rice SE]]
-
[[Category: Hydrolase]]
+
-
[[Category: Miro]]
+
-
[[Category: Mitochondria]]
+
-
[[Category: Parkin]]
+

Current revision

hMiro1 C-domain GDP Complex C2221 Crystal Form

PDB ID 5ksp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools