This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5ug6
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Perforin C2 Domain - T431D== | ==Perforin C2 Domain - T431D== | ||
| - | <StructureSection load='5ug6' size='340' side='right' caption='[[5ug6]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='5ug6' size='340' side='right'caption='[[5ug6]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5ug6]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5ug6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UG6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UG6 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ug6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ug6 OCA], [https://pdbe.org/5ug6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ug6 RCSB], [https://www.ebi.ac.uk/pdbsum/5ug6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ug6 ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/PERF_MOUSE PERF_MOUSE] Plays a key role in secretory granule-dependent cell death, and in defense against virus-infected or neoplastic cells. Can insert into the membrane of target cells in its calcium-bound form, oligomerize and form large pores. Promotes cytolysis and apoptosis of target cells by facilitating the uptake of cytotoxic granzymes.<ref>PMID:3261391</ref> <ref>PMID:8164737</ref> <ref>PMID:7526382</ref> <ref>PMID:19446473</ref> <ref>PMID:21037563</ref> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 20: | Line 19: | ||
</div> | </div> | ||
<div class="pdbe-citations 5ug6" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5ug6" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Cytolysin 3D structures|Cytolysin 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Mus musculus]] |
| - | [[Category: | + | [[Category: Conroy PJ]] |
| - | [[Category: | + | [[Category: Law RHP]] |
| - | [[Category: | + | [[Category: Voskoboinik I]] |
| - | [[Category: | + | [[Category: Whisstock JC]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Perforin C2 Domain - T431D
| |||||||||||
