5vqh

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(New page: '''Unreleased structure''' The entry 5vqh is ON HOLD Authors: Paul A. Hubbard, Xinlei Pan, Akashi Ohtaki, Randall McNally, Shozo Honda, Yohei Kirino, Ramachandran Murali Description: C...)
Current revision (13:55, 4 October 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5vqh is ON HOLD
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==Crystal structure of the extended Tudor domain from BmPAPI in complex with sDMA==
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<StructureSection load='5vqh' size='340' side='right'caption='[[5vqh]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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Authors: Paul A. Hubbard, Xinlei Pan, Akashi Ohtaki, Randall McNally, Shozo Honda, Yohei Kirino, Ramachandran Murali
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5vqh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VQH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VQH FirstGlance]. <br>
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Description: Crystal structure of the extended Tudor domain from BmPAPI in complex with sDMA
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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[[Category: Unreleased Structures]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2MR:N3,+N4-DIMETHYLARGININE'>2MR</scene></td></tr>
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[[Category: Paul A. Hubbard, Xinlei Pan, Akashi Ohtaki, Randall Mcnally, Shozo Honda, Yohei Kirino, Ramachandran Murali]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vqh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vqh OCA], [https://pdbe.org/5vqh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vqh RCSB], [https://www.ebi.ac.uk/pdbsum/5vqh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vqh ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TDRKH_BOMMO TDRKH_BOMMO] Participates in the primary piRNA biogenesis pathway and is required during spermatogenesis to repress transposable elements and prevent their mobilization, which is essential for the germline integrity (PubMed:23970546, PubMed:26919431). The piRNA metabolic process mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins (Siwi or Ago3) and govern the methylation and subsequent repression of transposons (PubMed:23970546, PubMed:26919431). Required for the final steps of primary piRNA biogenesis by participating in the processing of 31-37 nt intermediates into mature piRNAs: acts by recruiting the exonuclease PNLDC1/trimmer to Siwi-bound pre-piRNAs (PubMed:26919431).<ref>PMID:23970546</ref> <ref>PMID:26919431</ref>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Bombyx mori]]
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[[Category: Large Structures]]
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[[Category: Honda S]]
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[[Category: Hubbard PA]]
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[[Category: Kirino Y]]
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[[Category: McNally R]]
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[[Category: Murali R]]
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[[Category: Ohtaki A]]
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[[Category: Pan X]]

Current revision

Crystal structure of the extended Tudor domain from BmPAPI in complex with sDMA

PDB ID 5vqh

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