This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5vr9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:56, 4 October 2023) (edit) (undo)
 
Line 1: Line 1:
==CH1/Ckappa Fab based on Matuzumab==
==CH1/Ckappa Fab based on Matuzumab==
-
<StructureSection load='5vr9' size='340' side='right' caption='[[5vr9]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
+
<StructureSection load='5vr9' size='340' side='right'caption='[[5vr9]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5vr9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VR9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5VR9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5vr9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VR9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VR9 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5vsh|5vsh]], [[5vsi|5vsi]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">IGH@ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vr9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vr9 OCA], [https://pdbe.org/5vr9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vr9 RCSB], [https://www.ebi.ac.uk/pdbsum/5vr9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vr9 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5vr9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vr9 OCA], [http://pdbe.org/5vr9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vr9 RCSB], [http://www.ebi.ac.uk/pdbsum/5vr9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vr9 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6GMX6_HUMAN Q6GMX6_HUMAN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
-
[[Category: Hendle, J]]
+
[[Category: Large Structures]]
-
[[Category: Bispecific antibody]]
+
[[Category: Hendle J]]
-
[[Category: Ch1/ckappa interface]]
+
-
[[Category: Computational design]]
+
-
[[Category: Heavy chain/light chain interface]]
+
-
[[Category: Immune system]]
+

Current revision

CH1/Ckappa Fab based on Matuzumab

PDB ID 5vr9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools