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6b55
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==Crystal structure of the Plant Defensin NaD1 complexed with phosphatidic acid== | ==Crystal structure of the Plant Defensin NaD1 complexed with phosphatidic acid== | ||
| - | <StructureSection load='6b55' size='340' side='right' caption='[[6b55]], [[Resolution|resolution]] 2.50Å' scene=''> | + | <StructureSection load='6b55' size='340' side='right'caption='[[6b55]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6b55]] is a 20 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[6b55]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Nicotiana_alata Nicotiana alata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6B55 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6B55 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PA8:1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHATE'>PA8</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PA8:1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHATE'>PA8</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6b55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6b55 OCA], [https://pdbe.org/6b55 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6b55 RCSB], [https://www.ebi.ac.uk/pdbsum/6b55 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6b55 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/DEF_NICAL DEF_NICAL] Plant defense peptide with antifungal activity against F.oxysporum and B.cinerea. Retards the growth of the Lepidopteran insect pests H.armigera and H.punctigera. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 18: | Line 19: | ||
</div> | </div> | ||
<div class="pdbe-citations 6b55" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 6b55" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Defensin 3D structures|Defensin 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Hulett | + | [[Category: Nicotiana alata]] |
| - | [[Category: Humble | + | [[Category: Hulett M]] |
| - | [[Category: Jarva | + | [[Category: Humble C]] |
| - | [[Category: Kvansakul | + | [[Category: Jarva M]] |
| - | [[Category: Lay | + | [[Category: Kvansakul M]] |
| - | [[Category: Phan | + | [[Category: Lay FT]] |
| - | + | [[Category: Phan K]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of the Plant Defensin NaD1 complexed with phosphatidic acid
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Categories: Large Structures | Nicotiana alata | Hulett M | Humble C | Jarva M | Kvansakul M | Lay FT | Phan K
