This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6cwf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:12, 4 October 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of SpaA-SLH in complex with 4,6-Pyr-beta-D-ManNAcOMe==
==Crystal structure of SpaA-SLH in complex with 4,6-Pyr-beta-D-ManNAcOMe==
-
<StructureSection load='6cwf' size='340' side='right' caption='[[6cwf]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
+
<StructureSection load='6cwf' size='340' side='right'caption='[[6cwf]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6cwf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_6344 Atcc 6344]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CWF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6CWF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6cwf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Paenibacillus_alvei Paenibacillus alvei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CWF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6CWF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6LA:methyl+2-(acetylamino)-4,6-O-[(1S)-1-carboxyethylidene]-2-deoxy-beta-D-mannopyranoside'>6LA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6cwc|6cwc]], [[6cwh|6cwh]], [[6cwi|6cwi]], [[6cwl|6cwl]], [[6cwm|6cwm]], [[6cwn|6cwn]], [[6cwr|6cwr]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6LA:methyl+2-(acetylamino)-4,6-O-[(1S)-1-carboxyethylidene]-2-deoxy-beta-D-mannopyranoside'>6LA</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">spaA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=44250 ATCC 6344])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6cwf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cwf OCA], [https://pdbe.org/6cwf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6cwf RCSB], [https://www.ebi.ac.uk/pdbsum/6cwf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6cwf ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6cwf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cwf OCA], [http://pdbe.org/6cwf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6cwf RCSB], [http://www.ebi.ac.uk/pdbsum/6cwf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6cwf ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/C1JZ07_PAEAL C1JZ07_PAEAL]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 6344]]
+
[[Category: Large Structures]]
-
[[Category: Blackler, R J]]
+
[[Category: Paenibacillus alvei]]
-
[[Category: Evans, S V]]
+
[[Category: Blackler RJ]]
-
[[Category: S-layer]]
+
[[Category: Evans SV]]
-
[[Category: Scwp]]
+
-
[[Category: Secondary cell wall polymer]]
+
-
[[Category: Slh]]
+
-
[[Category: Sugar binding protein]]
+
-
[[Category: Surface layer homology domain]]
+

Current revision

Crystal structure of SpaA-SLH in complex with 4,6-Pyr-beta-D-ManNAcOMe

PDB ID 6cwf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools