3akc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:47, 4 October 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of CMP kinase in complex with CDP and ADP from Thermus thermophilus HB8==
==Crystal structure of CMP kinase in complex with CDP and ADP from Thermus thermophilus HB8==
-
<StructureSection load='3akc' size='340' side='right' caption='[[3akc]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
+
<StructureSection load='3akc' size='340' side='right'caption='[[3akc]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3akc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AKC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AKC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3akc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AKC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AKC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=CDP:CYTIDINE-5-DIPHOSPHATE'>CDP</scene>, <scene name='pdbligand=GD:GADOLINIUM+ATOM'>GD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3akd|3akd]], [[3ake|3ake]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=CDP:CYTIDINE-5-DIPHOSPHATE'>CDP</scene>, <scene name='pdbligand=GD:GADOLINIUM+ATOM'>GD</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TTHA0458 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3akc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3akc OCA], [https://pdbe.org/3akc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3akc RCSB], [https://www.ebi.ac.uk/pdbsum/3akc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3akc ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cytidylate_kinase Cytidylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.14 2.7.4.14] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3akc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3akc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3akc RCSB], [http://www.ebi.ac.uk/pdbsum/3akc PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/KCY_THET8 KCY_THET8]
==See Also==
==See Also==
Line 14: Line 15:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cytidylate kinase]]
+
[[Category: Large Structures]]
-
[[Category: Thermus thermophilus]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Kuramitsu, S]]
+
[[Category: Kuramitsu S]]
-
[[Category: Masui, R]]
+
[[Category: Masui R]]
-
[[Category: Mega, R]]
+
[[Category: Mega R]]
-
[[Category: Nakagawa, N]]
+
[[Category: Nakagawa N]]
-
[[Category: Cdp and adp complex]]
+
-
[[Category: Closed conformation]]
+
-
[[Category: Cmp kinase]]
+
-
[[Category: Nucleotide metabolism]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of CMP kinase in complex with CDP and ADP from Thermus thermophilus HB8

PDB ID 3akc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools