This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Ras-related protein Rab 3D structures

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: ==3D structures of Ras-related protein Rab== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *Rab-1 GTPase domain 1...)
Current revision (10:22, 9 October 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
==3D structures of Ras-related protein Rab==
+
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} - For a general description of the protein see [[Ras-related protein Rab]]
-
 
+
-
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
+
{{#tree:id=OrganizedByTopic|openlevels=0|
{{#tree:id=OrganizedByTopic|openlevels=0|
-
*Rab-1 GTPase domain 1-178
+
*Rab-1A GTPase domain 1-178
-
**[[2fol]] – hRab-1 + GDP - human<br />
+
**[[2fol]] – hRab-1A + GDP - human<br />
-
**[[6sku]] – hRab-1 + AnkX + GDP<br />
+
**[[7eq2]] – hRab-1A (mutant) + GDP<br />
-
**[[5szh]], [[5szk]] – hRab-1 + Mical-cL + GNP<br />
+
**[[4fmb]] – hRab-1A + VirA + GDP<br />
-
**[[4i1o]] – hRab-1 + LepB + GDP<br />
+
**[[3tkl]] – hRab-1A + LidA + GTP<br />
-
**[[4fmb]] – hRab-1 + VirA + GDP<br />
+
**[[3sfv]] – hRab-1A (mutant) + LidA + GDP<br />
-
**[[3tkl]] – hRab-1 + LidA + GTP<br />
+
**[[3l0i]] – hRab-1A + DrrA <br />
-
**[[3sfv]] – hRab-1 (mutant) + LidA + GDP<br />
+
**[[4jvs]] – hRab-1A + protein + GDP <br />
-
**[[3nkv]] – hRab-1 + GNP + AMP<br />
+
**[[4fmc]] – hRab-1A + Espg + GDP <br />
-
**[[3jza]], [[2wwx]], [[3l0i]] – hRab-1 + DrrA <br />
+
**[[4fme]] – hRab-1A + Espg + Arf6 + GDP <br />
-
**[[5o74]] – hRab-1 + DrrA + GDP <br />
+
**[[4fmc]] – hRab-1A + Espg + GDP <br />
 +
**[[4iru]] – hRab-1A + LepB + GDP <br />
-
*Rab-2
+
*Rab-1B
-
**[[2a5j]] – hRab-2 + GDP<br />
+
**[[4hlq]] – hRab-1B + TBC1D20 + GDP <br />
 +
**[[8alk]] – hRab-1B (mutant) + phosphocholine hydrolase LEM3 + GDP <br />
 +
**[[6sku]] – hRab-1B + AnkX + GDP<br />
 +
**[[5szh]], [[5szk]] – hRab-1B + Mical-cL + GNP<br />
 +
**[[4i1o]] – hRab-1B + LepB + GDP<br />
 +
**[[3nkv]] – hRab-1B + GNP + AMP<br />
 +
**[[3jza]], [[2wwx]] – hRab-1B + DrrA <br />
 +
**[[5o74]] – hRab-1B + DrrA + GDP <br />
-
*Rab-3
+
*Rab-2B
-
**[[2gf9]] – hRab-3 + GDP <br />
+
**[[2a5j]] – hRab-2B + GDP<br />
-
**[[3rab]] – Rab-3 + GNP - rat<br />
+
 
 +
*Rab-3A or rabphilin-3A
 +
 
 +
**[[1zbd]] – hRab-3A + GTP <br />
 +
**[[3rab]] – rRab-3A + GNP - rat<br />
**[[4rkf]] – DmRab-3 + GDP - ''Drosophila melanogaster''<br />
**[[4rkf]] – DmRab-3 + GDP - ''Drosophila melanogaster''<br />
 +
 +
*Rab-3B
 +
 +
**[[8a4b]] – hRab-3B + Rep-15 + GTP <br />
 +
**[[8a4c]] – hRab-3B + Rep-15 + GNP <br />
 +
 +
*Rab-3C
 +
 +
**[[6y7g]] – hRab-3C + GDP <br />
 +
**[[8a4a]] – bRab-3C + Rep-15 + GNP - bovine<br />
 +
 +
*Rab-3D
 +
 +
**[[2gf9]] – hRab-3D + GDP <br />
*Rab-4
*Rab-4
Line 31: Line 55:
**[[2o52]] – hRab-4 + GDP<br />
**[[2o52]] – hRab-4 + GDP<br />
**[[1yu9]] – hRab-4 + GNP<br />
**[[1yu9]] – hRab-4 + GNP<br />
 +
 +
*Rab-5A GTP-binding domain 15-184
 +
 +
**[[1n6h]], [[1n6r]], [[1r2q]] – hRab-5A + GNP<br />
 +
**[[1n6o]], [[1n6p]] – hRab-5A (mutant) + GNP<br />
 +
**[[1tu4]] – hRab-5A + GDP<br />
 +
**[[1n6i]] – hRab-5A (mutant) + GDP<br />
 +
**[[1n6k]], [[1n6l]] – hRab-5A (mutant) + GTP<br />
 +
**[[4q9u]] – hRab-5A + RABEX-5 + RAB5 <br />
 +
**[[1tu3]] – hRab-5A + Rabaptin 5 + GNP <br />
 +
**[[3mjh]] – hRab-5A + EEA1 + GTP <br />
 +
 +
*Rab-5B
 +
 +
**[[2hei]] – hRab-5B + GDP<br />
*Rab-5C
*Rab-5C
**[[4kyi]] – hRab-5C + VipD + GNP<br />
**[[4kyi]] – hRab-5C + VipD + GNP<br />
-
**[[1z02]] – mRab-5C (mutant) + GNP - mouse<br />
+
**[[1z07]] – mRab-5C (mutant) + GNP - mouse<br />
**[[1z0d]], [[1z0a]] – mRab-5C + GDP <br />
**[[1z0d]], [[1z0a]] – mRab-5C + GDP <br />
**[[1huq]] – mRab-5C + GNP <br />
**[[1huq]] – mRab-5C + GNP <br />
 +
**[[2y8e]] – DmRab-5C + GNP <br />
-
*Rab-6
+
*Rab-6A
-
**[[2e9s]], [[2fe4]], [[4dkx]] – hRab-6 + GDP <br />
+
**[[4dkx]] – hRab-6A + GDP <br />
-
**[[2ffq]] – hRab-6 + GSP <br />
+
**[[2gil]] – hRab-6A + GTP <br />
-
**[[2gil]] – hRab-6 + GTP <br />
+
**[[1yzq]] – hRab-6 + GNP <br />
**[[1yzq]] – hRab-6 + GNP <br />
-
**[[3bbp]] – hRab-6 + GCC185 + GTP <br />
+
**[[3bbp]] – hRab-6A + GCC185 + GTP <br />
-
**[[3cwz]] – mRab-6 + R6IP1 + GTP <br />
+
**[[3cwz]] – mRab-6A + R6IP1 + GTP <br />
-
**[[5lef]] – mRab-6 + KIF20A + GTP <br />
+
**[[5lef]] – mRab-6A + KIF20A + GTP <br />
-
**[[2y8e]] – DmRab-5C + GNP <br />
+
 
 +
*Rab-6B
 +
 
 +
**[[2e9s]], [[2fe4]] – hRab-6B + GDP <br />
 +
**[[2ffq]] – hRab-6B + GSP <br />
 +
**[[8ij9]] – mRab-6B (mutant) + ELKS1 + GTP <br />
 +
 
 +
*Rab-7A
 +
 
 +
**[[1t91]], [[3law]] – hRab-7A (mutant) + GTP <br />
 +
**[[6wcw]] – hRab-7A + rubicon + GTP <br />
 +
**[[6iyb]] – hRab-7A (mutant) + OSBP-related protein + GTP <br />
 +
**[[1yhn]] – hRab-7A (mutant) + Rilp + GTP <br />
 +
**[[5z2m]] – mRab-7A (mutant) + OSBP-related protein + GTP <br />
 +
**[[1vg1]] – rRab-7A + GDP <br />
 +
**[[1vg0]], [[1vg9]] – rRab-7A + Rep-1 + GDP <br />
*Rab-7L1
*Rab-7L1
Line 54: Line 108:
**[[6hh2]] – hRab-7L1 + GDP <br />
**[[6hh2]] – hRab-7L1 + GDP <br />
-
*Rab-8
 
-
**[[6sq2]] – hRab-8 + GTP<br />
+
*Rab-8A or oncogene C-Mel
-
**[[6stg]], [[4lhw]] – hRab-8 + GNP<br />
+
 
-
**[[6stf]], [[4lhv]] – hRab-8 + GDP<br />
+
**[[4li0]] – hRab-8A + GDP<br />
 +
**[[6sq2]] – hRab-8A + GTP<br />
 +
**[[6whe]] – hRab-8A (mutant) + GTP <br />
 +
**[[6stg]], [[4lhw]] – hRab-8A + GNP<br />
 +
**[[6stf]], [[4lhv]] – hRab-8A + GDP<br />
 +
**[[4lhx]], [[4lhy]] – hRab-8A + Rabin-3 <br />
 +
**[[4lhz]] – hRab-8A + Rabin-8 + GTP <br />
 +
**[[2fu5]] – hRab-8A + MSS4<br />
 +
**[[6rir]], [[7lwb]] – hRab-8A (mutant) + RILP-like protein + GTP <br />
 +
**[[6zsi]], [[6zsj]] – hRab-8A + EH domain-binding protein + GNP <br />
 +
**[[7bwt]] – hRab-8A + SOPD + GDP <br />
 +
**[[6yx5]] – hRab-8A + DrrA + GNP <br />
 +
**[[3tnf]] – hRab-8A + LidA + GNP <br />
 +
**[[3qbt]] – hRab-8A + Ocrl1 + GNP <br />
 +
 
 +
*Rab-9A
 +
 
 +
**[[1wms]] – hRab-9A + GDP<br />
 +
**[[7e1t]] – hRab-9A (mutant) + NUDE + GTP<br />
 +
**[[1s8f]] – Rab-9A + GDP - dog<br />
 +
**[[1yzl]] – mRab-9A + GNP<br />
 +
**[[4qxa]] – mRab-9A + RUTBC2 + GTP<br />
 +
 
 +
*Rab-9B
 +
 
 +
**[[2ocb]] – hRab-9B + GNP<br />
-
*Rab-9
+
*Rab-10
-
**[[1wms]] – hRab-9 + GDP<br />
+
**[[5szj]] – hRab-10 + Mical-cL + GNP<br />
-
**[[2ocb]] – hRab-9 + GNP<br />
+
**[[5lpn]], [[5szi]] – hRab-10 + Mical-1 + GNP<br />
-
**[[1s8f]] – Rab-9 + GDP - dog<br />
+
-
**[[1yzl]] – mRab-9 + GNP<br />
+
-
**[[4qxa]] – mRab-9 + RUTBC2 + GTP<br />
+
*Rab-11A complex with nucleotide
*Rab-11A complex with nucleotide
-
**[[1oiv]], [[6yi1]] – hRab-11A + GDP<br />
+
**[[1oiv]], [[6iy1]] – hRab-11A + GDP<br />
**[[1oix]] – hRab-11A (mutant) + GDP <br />
**[[1oix]] – hRab-11A (mutant) + GDP <br />
**[[5ez5]] – hRab-11A (mutant) + GTP <br />
**[[5ez5]] – hRab-11A (mutant) + GTP <br />
Line 91: Line 166:
**[[4lwz]], [[4lx0]] – hRab-11A + unconventional myosin-Vb<br />
**[[4lwz]], [[4lx0]] – hRab-11A + unconventional myosin-Vb<br />
**[[4fmd]] – hRab-11A + EspG + GDP<br />
**[[4fmd]] – hRab-11A + EspG + GDP<br />
 +
**[[6ixv]] – hRab-11A + SH3 domain-binding protein 5<br />
**[[6djl]] – hRab-11A (mutant) + SH3 domain-binding protein 5<br />
**[[6djl]] – hRab-11A (mutant) + SH3 domain-binding protein 5<br />
**[[5fbl]], [[5fbq]], [[5fbr]], [[5fbv]], [[5fbw]] – hRab-11A + PI4KB + inhibitor<br />
**[[5fbl]], [[5fbq]], [[5fbr]], [[5fbv]], [[5fbw]] – hRab-11A + PI4KB + inhibitor<br />
Line 100: Line 176:
**[[2f9l]] – hRab-11B + GDP <br />
**[[2f9l]] – hRab-11B + GDP <br />
**[[2f9m]] – hRab-11B + GNP <br />
**[[2f9m]] – hRab-11B + GNP <br />
 +
**[[4ojk]] – hRab-11B (mutant) + CGK2 + GDP <br />
*Rab-12
*Rab-12
Line 113: Line 190:
**[[1x3s]] – hRab-18 + GNP <br />
**[[1x3s]] – hRab-18 + GNP <br />
 +
 +
*Rab-21
 +
 +
**[[1z0i]] – hRab-21 + GDP <br />
 +
**[[1yzt]], [[1yzu]] – hRab-21 + GNP <br />
 +
**[[1z08]] – hRab-21 (mutant) + GNP <br />
 +
**[[2ot3]] – hRab-21 + Rabex-5 <br />
*Rab-22
*Rab-22
Line 132: Line 216:
**[[2g6b]] – hRab-26 + GNP <br />
**[[2g6b]] – hRab-26 + GNP <br />
-
*Rab-27
+
*Rab-27A
-
**[[2f7s]] – hRab-27 + GDP <br />
+
**[[6huf]] – hRab-27A + GNP <br />
-
**[[2iey]], [[2iez]], [[2if0]] – mRab-27 + GDP <br />
+
**[[3bc1]] – hRab-27A + Slp2A + GNP <br />
-
**[[2zet]] – mRab-27 + melanophilin + GDP <br />
+
 
 +
*Rab-27B
 +
 
 +
**[[2f7s]] – hRab-27B + GDP <br />
 +
**[[2iey]], [[2iez]], [[2if0]] – mRab-27B + GDP <br />
 +
**[[2zet]] – mRab-27B + melanophilin + GDP <br />
*Rab-28
*Rab-28
Line 155: Line 244:
**[[6ff8]] – hRab-32 + GTP <br />
**[[6ff8]] – hRab-32 + GTP <br />
**[[5oed]], [[5oec]] – hRab-32 + GtgE + GDP <br />
**[[5oed]], [[5oec]] – hRab-32 + GtgE + GDP <br />
 +
**[[4cz2]] – hRab-32 + Ankyrin repeat domain-containing protein 27 + GCP <br />
 +
**[[4cym]] – hRab-32 (mutant) + Ankyrin repeat domain-containing protein 27 + GCP <br />
*Rab-33
*Rab-33
Line 181: Line 272:
**[[2hup]] – hRab-43 + GDP <br />
**[[2hup]] – hRab-43 + GDP <br />
 +
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

Updated on 09-October-2023 - For a general description of the protein see Ras-related protein Rab


Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Jaime Prilusky

Retrieved from "http://52.214.119.220/wiki/index.php/Ras-related_protein_Rab_3D_structures"
Personal tools