This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6dex

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:04, 11 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6dex' size='340' side='right'caption='[[6dex]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='6dex' size='340' side='right'caption='[[6dex]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6dex]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ashgo Ashgo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DEX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DEX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6dex]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Eremothecium_gossypii_ATCC_10895 Eremothecium gossypii ATCC 10895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DEX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DEX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AGOS_ABR011W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=284811 ASHGO]), SHU2, AGR140C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=284811 ASHGO])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dex FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dex OCA], [http://pdbe.org/6dex PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dex RCSB], [http://www.ebi.ac.uk/pdbsum/6dex PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dex ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dex FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dex OCA], [https://pdbe.org/6dex PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dex RCSB], [https://www.ebi.ac.uk/pdbsum/6dex PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dex ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/SHU2_ASHGO SHU2_ASHGO]] Plays a role in a RAD51/RAD54-dependent homologous recombination repair (HRR) pathway to repair MMS-induced lesions during S-phase. Required for error-free repair of spontaneous and induced DNA lesions to protect the genome from mutation (By similarity).
+
[https://www.uniprot.org/uniprot/Q75DL0_ASHGO Q75DL0_ASHGO]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ashgo]]
+
[[Category: Eremothecium gossypii ATCC 10895]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Corbett, K D]]
+
[[Category: Corbett KD]]
-
[[Category: Singh, N]]
+
[[Category: Singh N]]
-
[[Category: Homologous recombination]]
+
-
[[Category: Rad51 paralog]]
+
-
[[Category: Recombination]]
+
-
[[Category: Shu complex]]
+

Current revision

Structure of Eremothecium gossypii Shu1:Shu2 complex

PDB ID 6dex

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools