6mx6
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6mx6 is ON HOLD Authors: Li, Z., Li, H. Description: The Prp8 intein of Cryptococcus neoformans Category: Unreleased Structures [[Category: Li,...) |
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- | '''Unreleased structure''' | ||
- | The | + | ==The Prp8 intein of Cryptococcus neoformans== |
+ | <StructureSection load='6mx6' size='340' side='right'caption='[[6mx6]], [[Resolution|resolution]] 1.75Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6mx6]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptococcus_neoformans_var._grubii_H99 Cryptococcus neoformans var. grubii H99]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MX6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6MX6 FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.749Å</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6mx6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mx6 OCA], [https://pdbe.org/6mx6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6mx6 RCSB], [https://www.ebi.ac.uk/pdbsum/6mx6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6mx6 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/J9VI50_CRYNH J9VI50_CRYNH] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The spliceosome is a large ribonucleoprotein complex that removes introns from pre-mRNAs. At its functional core lies the essential pre-mRNA processing factor 8 (Prp8) protein. Across diverse eukaryotes, this protein cofactor of RNA catalysis harbors a self-splicing element called an intein. Inteins in Prp8 are extremely pervasive and are found at 7 different sites in various species. Here, we focus on the Prp8 intein from Cryptococcus neoformans (Cne), a human fungal pathogen. We solved the crystal structure of this intein, revealing structural homology among protein splicing sequences in eukaryotes, including the Hedgehog C terminus. Working with the Cne Prp8 intein in a reporter assay, we find that the biologically relevant divalent metals copper and zinc inhibit intein splicing, albeit by 2 different mechanisms. Copper likely stimulates reversible modifications on a catalytically important cysteine, whereas zinc binds at the terminal asparagine and the same critical cysteine. Importantly, we also show that copper treatment inhibits Prp8 protein splicing in Cne. Lastly, an intein-containing Prp8 precursor model is presented, suggesting that metal-induced protein splicing inhibition would disturb function of both Prp8 and the spliceosome. These results indicate that Prp8 protein splicing can be modulated, with potential functional implications for the spliceosome. | ||
- | + | Spliceosomal Prp8 intein at the crossroads of protein and RNA splicing.,Green CM, Li Z, Smith AD, Novikova O, Bacot-Davis VR, Gao F, Hu S, Banavali NK, Thiele DJ, Li H, Belfort M PLoS Biol. 2019 Oct 10;17(10):e3000104. doi: 10.1371/journal.pbio.3000104., eCollection 2019 Oct. PMID:31600193<ref>PMID:31600193</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: Li | + | <div class="pdbe-citations 6mx6" style="background-color:#fffaf0;"></div> |
- | [[Category: Li | + | |
+ | ==See Also== | ||
+ | *[[Pre-mRNA splicing factors 3D structures|Pre-mRNA splicing factors 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Cryptococcus neoformans var. grubii H99]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Li H]] | ||
+ | [[Category: Li Z]] |
Current revision
The Prp8 intein of Cryptococcus neoformans
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