This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6osu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:16, 11 October 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='6osu' size='340' side='right'caption='[[6osu]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
<StructureSection load='6osu' size='340' side='right'caption='[[6osu]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6osu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Fratt Fratt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OSU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6OSU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6osu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Francisella_tularensis_subsp._tularensis_SCHU_S4 Francisella tularensis subsp. tularensis SCHU S4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OSU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6OSU FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.44&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dacD, FTT_1029, BZ14_1819 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=177416 FRATT])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6osu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6osu OCA], [https://pdbe.org/6osu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6osu RCSB], [https://www.ebi.ac.uk/pdbsum/6osu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6osu ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6osu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6osu OCA], [http://pdbe.org/6osu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6osu RCSB], [http://www.ebi.ac.uk/pdbsum/6osu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6osu ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5NG28_FRATT Q5NG28_FRATT]
 +
 +
==See Also==
 +
*[[Carboxypeptidase 3D structures|Carboxypeptidase 3D structures]]
 +
*[[Penicillin-binding protein 3D structures|Penicillin-binding protein 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Fratt]]
+
[[Category: Francisella tularensis subsp. tularensis SCHU S4]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
+
[[Category: Di R]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Di, R]]
+
[[Category: Kim Y]]
-
[[Category: Joachimiak, A]]
+
[[Category: Skarina T]]
-
[[Category: Kim, Y]]
+
[[Category: Stogios P]]
-
[[Category: Skarina, T]]
+
-
[[Category: Stogios, P]]
+
-
[[Category: Csgid]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Penicillin binding protein]]
+
-
[[Category: Serine protease]]
+

Current revision

Crystal Structure of the D-alanyl-D-alanine carboxypeptidase DacD from Francisella tularensis

PDB ID 6osu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools