This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6pl5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:31, 11 October 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='6pl5' size='340' side='right'caption='[[6pl5]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
<StructureSection load='6pl5' size='340' side='right'caption='[[6pl5]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6pl5]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6PL5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6PL5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6pl5]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6PL5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6PL5 FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rodA, TTHA1241 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8]), TTHA1191 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6pl5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6pl5 OCA], [https://pdbe.org/6pl5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6pl5 RCSB], [https://www.ebi.ac.uk/pdbsum/6pl5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6pl5 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidoglycan_glycosyltransferase Peptidoglycan glycosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.129 2.4.1.129] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6pl5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6pl5 OCA], [http://pdbe.org/6pl5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6pl5 RCSB], [http://www.ebi.ac.uk/pdbsum/6pl5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6pl5 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/Q5SIX3_THET8 Q5SIX3_THET8]] Peptidoglycan polymerase that is essential for cell wall elongation.[HAMAP-Rule:MF_02079]
+
[https://www.uniprot.org/uniprot/Q5SIX3_THET8 Q5SIX3_THET8] Peptidoglycan polymerase that is essential for cell wall elongation.[HAMAP-Rule:MF_02079]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 18:
</div>
</div>
<div class="pdbe-citations 6pl5" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6pl5" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
 +
*[[Penicillin-binding protein 3D structures|Penicillin-binding protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 25: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Peptidoglycan glycosyltransferase]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Thet8]]
+
[[Category: Bernhardt TG]]
-
[[Category: Bernhardt, T G]]
+
[[Category: Erlandson SC]]
-
[[Category: Erlandson, S C]]
+
[[Category: Kruse AC]]
-
[[Category: Kruse, A C]]
+
[[Category: Rohs PDA]]
-
[[Category: Rohs, P D.A]]
+
[[Category: Rudner DZ]]
-
[[Category: Rudner, D Z]]
+
[[Category: Sjodt M]]
-
[[Category: Sjodt, M]]
+
[[Category: Zheng S]]
-
[[Category: Zheng, S]]
+
-
[[Category: Elongasome]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Peptidoglycan transpeptidase]]
+
-
[[Category: Shape elongation division and sporulation]]
+
-
[[Category: Transmembrane protein]]
+

Current revision

Structural coordination of polymerization and crosslinking by a peptidoglycan synthase complex

PDB ID 6pl5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools