This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6vds
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6vds is ON HOLD Authors: Ghiladi, R.A., de Serrano, V.S., McGuire, A., Malewschik, T. Description: Crystal Structure of Dehaloperoxidase B in Compl...) |
|||
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate 4-bromo-ortho-cresol== | |
| - | + | <StructureSection load='6vds' size='340' side='right'caption='[[6vds]], [[Resolution|resolution]] 1.97Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[6vds]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Amphitrite_ornata Amphitrite ornata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VDS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VDS FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97Å</td></tr> | |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FDE:FE(III)+DEUTEROPORPHYRIN+IX'>FDE</scene>, <scene name='pdbligand=MWJ:4-bromo-2-methylphenol'>MWJ</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | [[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vds FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vds OCA], [https://pdbe.org/6vds PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vds RCSB], [https://www.ebi.ac.uk/pdbsum/6vds PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vds ProSAT]</span></td></tr> |
| - | [[ | + | </table> |
| - | [[Category: | + | == Function == |
| - | [[Category: Malewschik | + | [https://www.uniprot.org/uniprot/Q9NAV7_9ANNE Q9NAV7_9ANNE] |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Amphitrite ornata]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Ghiladi RA]] | ||
| + | [[Category: Malewschik T]] | ||
| + | [[Category: McGuire A]] | ||
| + | [[Category: De Serrano VS]] | ||
Current revision
Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate 4-bromo-ortho-cresol
| |||||||||||
