This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5leg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:57, 11 October 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Large structure}}
+
 
==Structure of the bacterial sex F pilus (pED208)==
==Structure of the bacterial sex F pilus (pED208)==
-
<StructureSection load='5leg' size='340' side='right' caption='[[5leg]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
+
<SX load='5leg' size='340' side='right' viewer='molstar' caption='[[5leg]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5leg]] is a 80 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhi Salmonella enterica subsp. enterica serovar typhi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LEG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LEG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5leg]] is a 80 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhi Salmonella enterica subsp. enterica serovar Typhi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LEG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LEG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.6&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5leg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5leg OCA], [http://pdbe.org/5leg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5leg RCSB], [http://www.ebi.ac.uk/pdbsum/5leg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5leg ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5leg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5leg OCA], [https://pdbe.org/5leg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5leg RCSB], [https://www.ebi.ac.uk/pdbsum/5leg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5leg ProSAT]</span></td></tr>
</table>
</table>
-
{{Large structure}}
 
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PIL1_SALTI PIL1_SALTI]] Propilin is the precursor of the pilus subunit, pilin, that forms conjugative pili, the filamentous surface appendages required for cell-to-cell contact during the earlier stages of bacterial conjugation, and that retract after contact is established. Mature pilin is assembled with the help of TraQ and TraX (By similarity).
+
[https://www.uniprot.org/uniprot/PIL1_SALTI PIL1_SALTI] Propilin is the precursor of the pilus subunit, pilin, that forms conjugative pili, the filamentous surface appendages required for cell-to-cell contact during the earlier stages of bacterial conjugation, and that retract after contact is established. Mature pilin is assembled with the help of TraQ and TraX (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
<references/>
<references/>
__TOC__
__TOC__
-
</StructureSection>
+
</SX>
-
[[Category: Salmonella enterica subsp. enterica serovar typhi]]
+
[[Category: Large Structures]]
-
[[Category: Costa, T R.D]]
+
[[Category: Salmonella enterica subsp. enterica serovar Typhi]]
-
[[Category: Egelman, E H]]
+
[[Category: Costa TRD]]
-
[[Category: Ilangovan, I]]
+
[[Category: Egelman EH]]
-
[[Category: Redzej, A]]
+
[[Category: Ilangovan I]]
-
[[Category: Santini, J M]]
+
[[Category: Redzej A]]
-
[[Category: Smith, T K]]
+
[[Category: Santini JM]]
-
[[Category: Ukleja, M]]
+
[[Category: Smith TK]]
-
[[Category: Waksman, G]]
+
[[Category: Ukleja M]]
-
[[Category: F-pilus conjugation type iv secretion system phospholipid]]
+
[[Category: Waksman G]]
-
[[Category: Protein fibril]]
+

Current revision

Structure of the bacterial sex F pilus (pED208)

5leg, resolution 3.60Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools