6wtr
From Proteopedia
(Difference between revisions)
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==Structure of Human pir-miRNA-300 Apical Loop Fused to the YdaO Riboswitch Scaffold== | ==Structure of Human pir-miRNA-300 Apical Loop Fused to the YdaO Riboswitch Scaffold== | ||
| - | <StructureSection load='6wtr' size='340' side='right'caption='[[6wtr]]' scene=''> | + | <StructureSection load='6wtr' size='340' side='right'caption='[[6wtr]], [[Resolution|resolution]] 3.08Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6n5r 6n5r]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WTR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6WTR FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6wtr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6n5r 6n5r]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WTR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6WTR FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6wtr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wtr OCA], [https://pdbe.org/6wtr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6wtr RCSB], [https://www.ebi.ac.uk/pdbsum/6wtr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6wtr ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.082Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2BA:(2R,3R,3AS,5R,7AR,9R,10R,10AS,12R,14AR)-2,9-BIS(6-AMINO-9H-PURIN-9-YL)OCTAHYDRO-2H,7H-DIFURO[3,2-D 3,2-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECINE-3,5,10,12-TETROL+5,12-DIOXIDE'>2BA</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6wtr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wtr OCA], [https://pdbe.org/6wtr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6wtr RCSB], [https://www.ebi.ac.uk/pdbsum/6wtr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6wtr ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Riboswitch 3D structures|Riboswitch 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Guo F]] | [[Category: Guo F]] | ||
[[Category: Peng Z]] | [[Category: Peng Z]] | ||
[[Category: Shoffner GM]] | [[Category: Shoffner GM]] | ||
Current revision
Structure of Human pir-miRNA-300 Apical Loop Fused to the YdaO Riboswitch Scaffold
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