This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6x2d
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal Structure of DNase I Domain of Ribonuclease E from Vibrio cholerae== | ==Crystal Structure of DNase I Domain of Ribonuclease E from Vibrio cholerae== | ||
| - | <StructureSection load='6x2d' size='340' side='right'caption='[[6x2d]]' scene=''> | + | <StructureSection load='6x2d' size='340' side='right'caption='[[6x2d]], [[Resolution|resolution]] 1.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6X2D OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6x2d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6X2D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6X2D FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6x2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6x2d OCA], [https://pdbe.org/6x2d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6x2d RCSB], [https://www.ebi.ac.uk/pdbsum/6x2d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6x2d ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q9KQG8_VIBCH Q9KQG8_VIBCH] Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs.[HAMAP-Rule:MF_00970] | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Ribonuclease 3D structures|Ribonuclease 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| + | [[Category: Vibrio cholerae O1 biovar El Tor str. N16961]] | ||
[[Category: Dubrovska I]] | [[Category: Dubrovska I]] | ||
[[Category: Kiryukhina O]] | [[Category: Kiryukhina O]] | ||
Current revision
Crystal Structure of DNase I Domain of Ribonuclease E from Vibrio cholerae
| |||||||||||
