This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7kd5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:21, 18 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7kd5' size='340' side='right'caption='[[7kd5]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
<StructureSection load='7kd5' size='340' side='right'caption='[[7kd5]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7kd5]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7KD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7KD5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7kd5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Menangle_virus Menangle virus] and [https://en.wikipedia.org/wiki/Serratia_sp._FS14 Serratia sp. FS14]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7KD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7KD5 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PIN:PIPERAZINE-N,N-BIS(2-ETHANESULFONIC+ACID)'>PIN</scene>, <scene name='pdbligand=PRO:PROLINE'>PRO</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.551&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PIN:PIPERAZINE-N,N-BIS(2-ETHANESULFONIC+ACID)'>PIN</scene>, <scene name='pdbligand=PRD_900001:alpha-maltose'>PRD_900001</scene>, <scene name='pdbligand=PRO:PROLINE'>PRO</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7kd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7kd5 OCA], [https://pdbe.org/7kd5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7kd5 RCSB], [https://www.ebi.ac.uk/pdbsum/7kd5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7kd5 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7kd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7kd5 OCA], [https://pdbe.org/7kd5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7kd5 RCSB], [https://www.ebi.ac.uk/pdbsum/7kd5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7kd5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/A0A4P1LXE0_SERSF A0A4P1LXE0_SERSF]] Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins.[RuleBase:RU365005]
+
[https://www.uniprot.org/uniprot/Q91MK1_9MONO Q91MK1_9MONO] Essential component of the RNA polymerase and the nascent chain assembly complex. Also required during RNA synthesis.[ARBA:ARBA00002047][https://www.uniprot.org/uniprot/A0A4P1LXE0_SERSF A0A4P1LXE0_SERSF] Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins.[RuleBase:RU365005]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Kingston, R L]]
+
[[Category: Menangle virus]]
-
[[Category: Webby, M N]]
+
[[Category: Serratia sp. FS14]]
-
[[Category: Paramyxovirus]]
+
[[Category: Kingston RL]]
-
[[Category: Pararubulavirus]]
+
[[Category: Webby MN]]
-
[[Category: Rna-dependent rna polymerase]]
+
-
[[Category: Viral protein]]
+

Current revision

Structure of the C-terminal domain of the Menangle virus phosphoprotein (residues 329 -388), fused to MBP. Space group P212121

PDB ID 7kd5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools