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7m13

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Current revision (16:03, 18 October 2023) (edit) (undo)
 
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<StructureSection load='7m13' size='340' side='right'caption='[[7m13]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='7m13' size='340' side='right'caption='[[7m13]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[7m13]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Camje Camje]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7M13 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7M13 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7m13]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7M13 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7M13 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fcl, Cj1428c ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=192222 CAMJE])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/GDP-L-fucose_synthase GDP-L-fucose synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.271 1.1.1.271] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7m13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7m13 OCA], [https://pdbe.org/7m13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7m13 RCSB], [https://www.ebi.ac.uk/pdbsum/7m13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7m13 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7m13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7m13 OCA], [https://pdbe.org/7m13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7m13 RCSB], [https://www.ebi.ac.uk/pdbsum/7m13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7m13 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/Q0P8I6_CAMJE Q0P8I6_CAMJE]] Catalyzes the two-step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.[HAMAP-Rule:MF_00956]
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[https://www.uniprot.org/uniprot/Q0P8I6_CAMJE Q0P8I6_CAMJE] Catalyzes the two-step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.[HAMAP-Rule:MF_00956]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Camje]]
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[[Category: Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]]
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[[Category: GDP-L-fucose synthase]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Anderson, T K]]
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[[Category: Anderson TK]]
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[[Category: Holden, H M]]
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[[Category: Holden HM]]
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[[Category: Raushel, F M]]
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[[Category: Raushel FM]]
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[[Category: Thoden, J B]]
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[[Category: Thoden JB]]
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[[Category: Capsular polysaccharide]]
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[[Category: Gluco-heptose synthase]]
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[[Category: Oxidoreductase]]
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Current revision

Crystal structure of CJ1428, a GDP-D-GLYCERO-L-GLUCO-HEPTOSE SYNTHASE from campylobacter jejuni in the presence of NADPH

PDB ID 7m13

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