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5lhb

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==POLYADPRIBOSYL GLYCOSIDASE IN COMPLEX WITH PDD00017262==
==POLYADPRIBOSYL GLYCOSIDASE IN COMPLEX WITH PDD00017262==
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<StructureSection load='5lhb' size='340' side='right' caption='[[5lhb]], [[Resolution|resolution]] 2.23&Aring;' scene=''>
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<StructureSection load='5lhb' size='340' side='right'caption='[[5lhb]], [[Resolution|resolution]] 2.23&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5lhb]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LHB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LHB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5lhb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LHB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LHB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6WJ:1-(CYCLOPROPYLMETHYL)-6-[[(1-METHYLCYCLOPROPYL)AMINO]-BIS(OXIDANYL)-$L^{4}-SULFANYL]-3-[(2-METHYL-1,3-THIAZOL-5-YL)METHYL]QUINAZOLINE-2,4-DIONE'>6WJ</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.23&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=6WK:(2~{R})-2-AZANYL-3-[[(2~{S},3~{S})-2,3-BIS(OXIDANYL)-4-SULFANYL-BUTYL]DISULFANYL]PROPANOIC+ACID'>6WK</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6WJ:1-(CYCLOPROPYLMETHYL)-6-[[(1-METHYLCYCLOPROPYL)AMINO]-BIS(OXIDANYL)-$L^{4}-SULFANYL]-3-[(2-METHYL-1,3-THIAZOL-5-YL)METHYL]QUINAZOLINE-2,4-DIONE'>6WJ</scene>, <scene name='pdbligand=6WK:(2~{R})-2-AZANYL-3-[[(2~{S},3~{S})-2,3-BIS(OXIDANYL)-4-SULFANYL-BUTYL]DISULFANYL]PROPANOIC+ACID'>6WK</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Poly(ADP-ribose)_glycohydrolase Poly(ADP-ribose) glycohydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.143 3.2.1.143] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lhb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lhb OCA], [https://pdbe.org/5lhb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lhb RCSB], [https://www.ebi.ac.uk/pdbsum/5lhb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lhb ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5lhb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lhb OCA], [http://pdbe.org/5lhb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lhb RCSB], [http://www.ebi.ac.uk/pdbsum/5lhb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lhb ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/PARG_HUMAN PARG_HUMAN]] Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. PARG acts both as an endo- and exoglycosidase, releasing PAR of different length as well as ADP-ribose monomers. Required for retinoid acid-dependent gene transactivation, probably by dePARsylating histone demethylase KDM4D, allowing chromatin derepression at RAR-dependent gene promoters.<ref>PMID:23102699</ref>
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[https://www.uniprot.org/uniprot/PARG_HUMAN PARG_HUMAN] Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. PARG acts both as an endo- and exoglycosidase, releasing PAR of different length as well as ADP-ribose monomers. Required for retinoid acid-dependent gene transactivation, probably by dePARsylating histone demethylase KDM4D, allowing chromatin derepression at RAR-dependent gene promoters.<ref>PMID:23102699</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 5lhb" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5lhb" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Poly(ADP-ribose) glycohydrolase 3D structures|Poly(ADP-ribose) glycohydrolase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Barkauskaite, E]]
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[[Category: Homo sapiens]]
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[[Category: Tucker, J]]
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[[Category: Large Structures]]
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[[Category: Competitive inhibitor]]
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[[Category: Barkauskaite E]]
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[[Category: Hydrolase]]
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[[Category: Tucker J]]

Current revision

POLYADPRIBOSYL GLYCOSIDASE IN COMPLEX WITH PDD00017262

PDB ID 5lhb

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