This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5lra

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:42, 18 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5lra' size='340' side='right'caption='[[5lra]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='5lra' size='340' side='right'caption='[[5lra]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5lra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Domesticated_barley Domesticated barley]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LRA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LRA FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5lra]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Hordeum_vulgare_subsp._vulgare Hordeum vulgare subsp. vulgare]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LRA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LRA FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5lr8|5lr8]], [[5lrb|5lrb]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PRD_900001:alpha-maltose'>PRD_900001</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lra OCA], [https://pdbe.org/5lra PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lra RCSB], [https://www.ebi.ac.uk/pdbsum/5lra PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lra ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5lra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lra OCA], [http://pdbe.org/5lra PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lra RCSB], [http://www.ebi.ac.uk/pdbsum/5lra PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lra ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/F2E0G2_HORVV F2E0G2_HORVV]] Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.[RuleBase:RU000587]
+
[https://www.uniprot.org/uniprot/F2E0G2_HORVV F2E0G2_HORVV] Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.[RuleBase:RU000587]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Domesticated barley]]
+
[[Category: Hordeum vulgare subsp. vulgare]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Phosphorylase]]
+
[[Category: Cuesta-Seijo JA]]
-
[[Category: Cuesta-Seijo, J A]]
+
[[Category: Krucewicz K]]
-
[[Category: Krucewicz, K]]
+
[[Category: Palcic MM]]
-
[[Category: Palcic, M M]]
+
[[Category: Ruzanski C]]
-
[[Category: Ruzanski, C]]
+
-
[[Category: Plastidial]]
+
-
[[Category: Starch]]
+
-
[[Category: Transferase]]
+

Current revision

Plastidial phosphorylase PhoI from barley in complex with maltotetraose

PDB ID 5lra

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5lra"
Personal tools