5lsc

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==The structure of the metallo-beta-lactamase VIM-2 in complex with a triazolylthioacetamide inhibitor==
==The structure of the metallo-beta-lactamase VIM-2 in complex with a triazolylthioacetamide inhibitor==
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<StructureSection load='5lsc' size='340' side='right' caption='[[5lsc]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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<StructureSection load='5lsc' size='340' side='right'caption='[[5lsc]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5lsc]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LSC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LSC FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5lsc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LSC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LSC FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=752:2-[5-[2-(1,3-BENZOTHIAZOL-2-YLAMINO)-2-OXIDANYLIDENE-ETHYL]SULFANYL-4~{H}-1,2,4-TRIAZOL-3-YL]BENZOIC+ACID'>752</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.497&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5lsc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lsc OCA], [http://pdbe.org/5lsc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lsc RCSB], [http://www.ebi.ac.uk/pdbsum/5lsc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lsc ProSAT]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=752:2-[5-[2-(1,3-BENZOTHIAZOL-2-YLAMINO)-2-OXIDANYLIDENE-ETHYL]SULFANYL-4~{H}-1,2,4-TRIAZOL-3-YL]BENZOIC+ACID'>752</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lsc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lsc OCA], [https://pdbe.org/5lsc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lsc RCSB], [https://www.ebi.ac.uk/pdbsum/5lsc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lsc ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/B8QIQ9_PSEAI B8QIQ9_PSEAI]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The increasing number of pathogens expressing metallo-beta-lactamases (MBLs), and in this way achieving resistance to beta-lactam antibiotics, is a significant threat to global public health. A promising strategy to treat such resistant pathogens is the co-administration of MBL inhibitors together with beta-lactam antibiotics. However, an MBL inhibitor suitable for clinical use has not yet been identified. Verona integron-encoded metallo-beta-lactamase 2 (VIM-2) is a widespread MBL with a broad substrate spectrum and hence is an interesting drug target for the treatment of beta-lactam-resistant infections. In this study, three triazolylthioacetamides were tested as inhibitors of VIM-2. One of the tested compounds showed clear inhibition of VIM-2, with an IC50 of 20 microM. The crystal structure of the inhibitor in complex with VIM-2 was obtained by DMSO-free co-crystallization and was solved at a resolution of 1.50 A. To our knowledge, this is the first structure of a triazolylthioacetamide inhibitor in complex with an MBL. Analysis of the structure shows that the inhibitor binds to the two zinc ions in the active site of VIM-2 and revealed detailed information on the interactions involved. Furthermore, the crystal structure showed that binding of the inhibitor induced a conformational change of the conserved residue Trp87.
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The structure of the metallo-beta-lactamase VIM-2 in complex with a triazolylthioacetamide inhibitor.,Christopeit T, Yang KW, Yang SK, Leiros HK Acta Crystallogr F Struct Biol Commun. 2016 Nov 1;72(Pt 11):813-819. Epub 2016, Oct 24. PMID:27834790<ref>PMID:27834790</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 5lsc" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Christopeit, T]]
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[[Category: Large Structures]]
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[[Category: Leiros, H K.S]]
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[[Category: Pseudomonas aeruginosa]]
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[[Category: Yang, K W]]
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[[Category: Christopeit T]]
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[[Category: Yang, S K]]
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[[Category: Leiros H-KS]]
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[[Category: Antibiotic resistance]]
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[[Category: Yang K-W]]
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[[Category: Carbapenemase]]
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[[Category: Yang S-K]]
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[[Category: Hydrolase]]
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[[Category: Verona integron-encoded metallo-beta-lactamase 2]]
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[[Category: Vim-2]]
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The structure of the metallo-beta-lactamase VIM-2 in complex with a triazolylthioacetamide inhibitor

PDB ID 5lsc

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