This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
8h58
From Proteopedia
(Difference between revisions)
m (Protected "8h58" [edit=sysop:move=sysop]) |
|||
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of YhaJ effector binding domain== | |
| - | + | <StructureSection load='8h58' size='340' side='right'caption='[[8h58]], [[Resolution|resolution]] 2.64Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[8h58]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8H58 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8H58 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.639Å</td></tr> | |
| - | [[Category: | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8h58 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8h58 OCA], [https://pdbe.org/8h58 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8h58 RCSB], [https://www.ebi.ac.uk/pdbsum/8h58 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8h58 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/YHAJ_ECO57 YHAJ_ECO57] Positive regulator partially required for expression of genes in the locus of effacement (LEE) large pathogenicity island (PAI). Also partially responsible for expression of neighboring gene dlsT (yhaO) during late exponential growth. Binds to DNA of promoter 1 in LEE and DNA from the dlsT promoter region.<ref>PMID:26727373</ref> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Escherichia coli]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Kim M]] | ||
| + | [[Category: Ryu SE]] | ||
Current revision
Crystal structure of YhaJ effector binding domain
| |||||||||||
