This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1g6k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:10, 25 October 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of glucose dehydrogenase mutant E96A complexed with NAD+==
==Crystal structure of glucose dehydrogenase mutant E96A complexed with NAD+==
-
<StructureSection load='1g6k' size='340' side='right' caption='[[1g6k]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='1g6k' size='340' side='right'caption='[[1g6k]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1g6k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_14581 Atcc 14581]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G6K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1G6K FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1g6k]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Priestia_megaterium Priestia megaterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G6K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G6K FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gco|1gco]], [[1gee|1gee]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucose_1-dehydrogenase Glucose 1-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.47 1.1.1.47] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g6k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g6k OCA], [https://pdbe.org/1g6k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g6k RCSB], [https://www.ebi.ac.uk/pdbsum/1g6k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g6k ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1g6k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g6k OCA], [http://pdbe.org/1g6k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1g6k RCSB], [http://www.ebi.ac.uk/pdbsum/1g6k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1g6k ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DHG_PRIMG DHG_PRIMG]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 14581]]
+
[[Category: Large Structures]]
-
[[Category: Glucose 1-dehydrogenase]]
+
[[Category: Priestia megaterium]]
-
[[Category: Kurisu, G]]
+
[[Category: Kurisu G]]
-
[[Category: Kusunoki, M]]
+
[[Category: Kusunoki M]]
-
[[Category: Osaki, S]]
+
[[Category: Osaki S]]
-
[[Category: Tabata, S]]
+
[[Category: Tabata S]]
-
[[Category: Urabe, I]]
+
[[Category: Urabe I]]
-
[[Category: Yamamoto, K]]
+
[[Category: Yamamoto K]]
-
[[Category: Oxidoreductase]]
+
-
[[Category: Short-chain dehydrogenase/reductase]]
+

Current revision

Crystal structure of glucose dehydrogenase mutant E96A complexed with NAD+

PDB ID 1g6k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools