This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1iu8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:12, 25 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1iu8' size='340' side='right'caption='[[1iu8]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='1iu8' size='340' side='right'caption='[[1iu8]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1iu8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/'pyrococcus_shinkaii' 'pyrococcus shinkaii']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IU8 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1IU8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1iu8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IU8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IU8 FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PH0596 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 'Pyrococcus shinkaii'])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pyroglutamyl-peptidase_I Pyroglutamyl-peptidase I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.19.3 3.4.19.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iu8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iu8 OCA], [https://pdbe.org/1iu8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iu8 RCSB], [https://www.ebi.ac.uk/pdbsum/1iu8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iu8 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1iu8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iu8 OCA], [http://pdbe.org/1iu8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1iu8 RCSB], [http://www.ebi.ac.uk/pdbsum/1iu8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1iu8 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PCP_PYRHO PCP_PYRHO]] Removes 5-oxoproline from various penultimate amino acid residues except L-proline.
+
[https://www.uniprot.org/uniprot/PCP_PYRHO PCP_PYRHO] Removes 5-oxoproline from various penultimate amino acid residues except L-proline.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 29: Line 28:
</div>
</div>
<div class="pdbe-citations 1iu8" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1iu8" style="background-color:#fffaf0;"></div>
- 
-
==See Also==
 
-
*[[Journal:Acta Cryst D:S2059798319000676|Journal:Acta Cryst D:S2059798319000676]]
 
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Pyrococcus shinkaii]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pyroglutamyl-peptidase I]]
+
[[Category: Pyrococcus horikoshii]]
-
[[Category: Kawamura, T]]
+
[[Category: Kawamura T]]
-
[[Category: Sakai, N]]
+
[[Category: Sakai N]]
-
[[Category: Sokabe, M]]
+
[[Category: Sokabe M]]
-
[[Category: Tanaka, I]]
+
[[Category: Tanaka I]]
-
[[Category: Watanabe, N]]
+
[[Category: Watanabe N]]
-
[[Category: Yao, M]]
+
[[Category: Yao M]]
-
[[Category: Hydrolase]]
+
-
[[Category: Thiol protease]]
+

Current revision

The X-ray Crystal Structure of Pyrrolidone-Carboxylate Peptidase from Hyperthermophilic Archaeon Pyrococcus horikoshii

PDB ID 1iu8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools