This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ujp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:39, 25 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1ujp' size='340' side='right'caption='[[1ujp]], [[Resolution|resolution]] 1.34&Aring;' scene=''>
<StructureSection load='1ujp' size='340' side='right'caption='[[1ujp]], [[Resolution|resolution]] 1.34&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1ujp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UJP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UJP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1ujp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UJP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UJP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.34&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Tryptophan_synthase Tryptophan synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.20 4.2.1.20] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ujp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujp OCA], [https://pdbe.org/1ujp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ujp RCSB], [https://www.ebi.ac.uk/pdbsum/1ujp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ujp ProSAT], [https://www.topsan.org/Proteins/RSGI/1ujp TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ujp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujp OCA], [https://pdbe.org/1ujp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ujp RCSB], [https://www.ebi.ac.uk/pdbsum/1ujp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ujp ProSAT], [https://www.topsan.org/Proteins/RSGI/1ujp TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/TRPA_THET2 TRPA_THET2]] The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate (By similarity).
+
[https://www.uniprot.org/uniprot/TRPA_THET2 TRPA_THET2] The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 37: Line 37:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Thet8]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Tryptophan synthase]]
+
[[Category: Asada Y]]
-
[[Category: Asada, Y]]
+
[[Category: Kunishima N]]
-
[[Category: Kunishima, N]]
+
[[Category: Kuramitsu S]]
-
[[Category: Kuramitsu, S]]
+
[[Category: Miyano M]]
-
[[Category: Miyano, M]]
+
[[Category: Yokoyama S]]
-
[[Category: Structural genomic]]
+
-
[[Category: Yokoyama, S]]
+
-
[[Category: Lyase]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Tryptophan]]
+

Current revision

Crystal Structure of Tryptophan Synthase A-Subunit From Thermus thermophilus HB8

PDB ID 1ujp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools