This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1v2i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:43, 25 October 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='1v2i' size='340' side='right'caption='[[1v2i]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='1v2i' size='340' side='right'caption='[[1v2i]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1v2i]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Hpiv-3 Hpiv-3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V2I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1V2I FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1v2i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_respirovirus_3 Human respirovirus 3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V2I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V2I FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1v3b|1v3b]], [[1v3c|1v3c]], [[1v3d|1v3d]], [[1v3e|1v3e]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Exo-alpha-sialidase Exo-alpha-sialidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.18 3.2.1.18] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v2i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v2i OCA], [https://pdbe.org/1v2i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v2i RCSB], [https://www.ebi.ac.uk/pdbsum/1v2i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v2i ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v2i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v2i OCA], [http://pdbe.org/1v2i PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1v2i RCSB], [http://www.ebi.ac.uk/pdbsum/1v2i PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1v2i ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6WJ03_9MONO Q6WJ03_9MONO] Attaches the virus to sialic acid-containing cell receptors and thereby initiating infection. Binding of HN protein to the receptor induces a conformational change that allows the F protein to trigger virion/cell membranes fusion.[ARBA:ARBA00025476]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 35: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Exo-alpha-sialidase]]
+
[[Category: Human respirovirus 3]]
-
[[Category: Hpiv-3]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Borg, N A]]
+
[[Category: Borg NA]]
-
[[Category: Colman, P M]]
+
[[Category: Colman PM]]
-
[[Category: Epa, V C]]
+
[[Category: Epa VC]]
-
[[Category: Lawrence, M C]]
+
[[Category: Lawrence MC]]
-
[[Category: McKimm-Breschkin, J L]]
+
[[Category: McKimm-Breschkin JL]]
-
[[Category: Pilling, P A]]
+
[[Category: Pilling PA]]
-
[[Category: Streltsov, V A]]
+
[[Category: Streltsov VA]]
-
[[Category: Varghese, J N]]
+
[[Category: Varghese JN]]
-
[[Category: Hydrolase]]
+
-
[[Category: Native]]
+
-
[[Category: Orthorhombic]]
+
-
[[Category: Piv3 hn]]
+

Current revision

Structure of the hemagglutinin-neuraminidase from human parainfluenza virus type III

PDB ID 1v2i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1v2i"
Personal tools