1vax

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:50, 25 October 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure of Uricase from Arthrobacter globiformis==
==Crystal Structure of Uricase from Arthrobacter globiformis==
-
<StructureSection load='1vax' size='340' side='right' caption='[[1vax]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
+
<StructureSection load='1vax' size='340' side='right'caption='[[1vax]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1vax]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VAX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VAX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1vax]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VAX FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1uox|1uox]], [[1vay|1vay]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Urate_oxidase Urate oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.3.3 1.7.3.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vax OCA], [https://pdbe.org/1vax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vax RCSB], [https://www.ebi.ac.uk/pdbsum/1vax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vax ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vax OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vax RCSB], [http://www.ebi.ac.uk/pdbsum/1vax PDBsum]</span></td></tr>
+
</table>
-
<table>
+
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/va/1vax_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/va/1vax_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vax ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arthrobacter globiformis]]
[[Category: Arthrobacter globiformis]]
-
[[Category: Urate oxidase]]
+
[[Category: Large Structures]]
-
[[Category: Hossain, M T.]]
+
[[Category: Hossain MT]]
-
[[Category: Imamura, S.]]
+
[[Category: Imamura S]]
-
[[Category: Sekiguchi, T.]]
+
[[Category: Sekiguchi T]]
-
[[Category: Suzuki, K.]]
+
[[Category: Suzuki K]]
-
[[Category: Takenaka, A.]]
+
[[Category: Takenaka A]]
-
[[Category: Yamamoto, T.]]
+
[[Category: Yamamoto T]]
-
[[Category: Oxidoreductase]]
+

Current revision

Crystal Structure of Uricase from Arthrobacter globiformis

PDB ID 1vax

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools