1xg0

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{{Seed}}
 
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[[Image:1xg0.png|left|200px]]
 
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==High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte rhodomonas CS24==
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The line below this paragraph, containing "STRUCTURE_1xg0", creates the "Structure Box" on the page.
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<StructureSection load='1xg0' size='340' side='right'caption='[[1xg0]], [[Resolution|resolution]] 0.97&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1xg0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodomonas_sp._CS24 Rhodomonas sp. CS24]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XG0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XG0 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.97&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DBV:15,16-DIHYDROBILIVERDIN'>DBV</scene>, <scene name='pdbligand=LYZ:5-HYDROXYLYSINE'>LYZ</scene>, <scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEB:PHYCOERYTHROBILIN'>PEB</scene></td></tr>
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{{STRUCTURE_1xg0| PDB=1xg0 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xg0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xg0 OCA], [https://pdbe.org/1xg0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xg0 RCSB], [https://www.ebi.ac.uk/pdbsum/1xg0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xg0 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PHE3_RHDS2 PHE3_RHDS2] Light-harvesting photosynthetic tetrapyrrole chromophore-protein from the phycobiliprotein complex.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xg/1xg0_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xg0 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Cryptophyte algae differ from cyanobacteria and red algae in the architecture of their photosynthetic light harvesting systems, even though all three are evolutionarily related. Central to cryptophyte light harvesting is the soluble antenna protein phycoerythrin 545 (PE545). The ultrahigh resolution crystal structure of PE545, isolated from a unicellular cryptophyte Rhodomonas CS24, is reported at both 1.1A and 0.97A resolution, revealing details of the conformation and environments of the chromophores. Absorption, emission and polarized steady state spectroscopy (298K, 77K), as well as ultrafast (20fs time resolution) measurements of population dynamics are reported. Coupled with complementary quantum chemical calculations of electronic transitions of the bilins, these enable assignment of spectral absorption characteristics to each chromophore in the structure. Spectral differences between the tetrapyrrole pigments due to chemical differences between bilins, as well as their binding and interaction with the local protein environment are described. Based on these assignments, and considering customized optical properties such as strong coupling, a model for light harvesting by PE545 is developed which explains the fast, directional harvesting of excitation energy. The excitation energy is funnelled from four peripheral pigments (beta158,beta82) into a central chromophore dimer (beta50/beta61) in approximately 1ps. Those chromophores, in turn, transfer the excitation energy to the red absorbing molecules located at the periphery of the complex in approximately 4ps. A final resonance energy transfer step sensitizes just one of the alpha19 bilins on a time scale of 22ps. Furthermore, it is concluded that binding of PE545 to the thylakoid membrane is not essential for efficient energy transfer to the integral membrane chlorophyll a-containing complexes associated with PS-II.
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===High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte rhodomonas CS24===
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Developing a structure-function model for the cryptophyte phycoerythrin 545 using ultrahigh resolution crystallography and ultrafast laser spectroscopy.,Doust AB, Marai CN, Harrop SJ, Wilk KE, Curmi PM, Scholes GD J Mol Biol. 2004 Nov 12;344(1):135-53. PMID:15504407<ref>PMID:15504407</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_15504407}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1xg0" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 15504407 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_15504407}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1XG0 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Rhodomonas_sp. Rhodomonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XG0 OCA].
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[[Category: Rhodomonas sp. CS24]]
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[[Category: Curmi PMG]]
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==Reference==
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[[Category: Doust AB]]
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<ref group="xtra">PMID:15504407</ref><ref group="xtra">PMID:10430868</ref><ref group="xtra">PMID:1559975</ref><references group="xtra"/>
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[[Category: Harrop SJ]]
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[[Category: Rhodomonas sp.]]
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[[Category: Marai CNJ]]
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[[Category: Curmi, P M.G.]]
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[[Category: Scholes GD]]
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[[Category: Doust, A B.]]
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[[Category: Wilk KE]]
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[[Category: Harrop, S J.]]
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[[Category: Marai, C N.J.]]
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[[Category: Scholes, G D.]]
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[[Category: Wilk, K E.]]
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[[Category: Cryptophyte]]
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[[Category: Light-harvesting protein]]
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[[Category: Phycoerythrin]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 11:54:59 2009''
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Current revision

High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte rhodomonas CS24

PDB ID 1xg0

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