This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ye5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:10, 25 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1ye5' size='340' side='right'caption='[[1ye5]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='1ye5' size='340' side='right'caption='[[1ye5]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1ye5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/'pyrococcus_shinkaii' 'pyrococcus shinkaii']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YE5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YE5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1ye5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YE5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YE5 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1v96|1v96]]</div></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ye5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ye5 OCA], [https://pdbe.org/1ye5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ye5 RCSB], [https://www.ebi.ac.uk/pdbsum/1ye5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ye5 ProSAT], [https://www.topsan.org/Proteins/RSGI/1ye5 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ye5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ye5 OCA], [https://pdbe.org/1ye5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ye5 RCSB], [https://www.ebi.ac.uk/pdbsum/1ye5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ye5 ProSAT], [https://www.topsan.org/Proteins/RSGI/1ye5 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/VAPC4_PYRHO VAPC4_PYRHO]] Toxic component of a toxin-antitoxin (TA) module. An RNase.[HAMAP-Rule:MF_00265]
+
[https://www.uniprot.org/uniprot/VAPC4_PYRHO VAPC4_PYRHO] Toxic component of a toxin-antitoxin (TA) module. An RNase.[HAMAP-Rule:MF_00265]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 32: Line 32:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Pyrococcus shinkaii]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Jeyakanthan, J]]
+
[[Category: Pyrococcus horikoshii]]
-
[[Category: Structural genomic]]
+
[[Category: Jeyakanthan J]]
-
[[Category: Tahirov, T H]]
+
[[Category: Tahirov TH]]
-
[[Category: Nucleotide binding protein]]
+
-
[[Category: Pin domain]]
+
-
[[Category: Rossmann fold]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Trna synthetase]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of hypothetical protein of unknown function from pyrococcus horikoshii OT3

PDB ID 1ye5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools