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1yk5

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Current revision (08:11, 25 October 2023) (edit) (undo)
 
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<StructureSection load='1yk5' size='340' side='right'caption='[[1yk5]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
<StructureSection load='1yk5' size='340' side='right'caption='[[1yk5]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1yk5]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"pyrococcus_abyssi"_erauso_et_al._1993 "pyrococcus abyssi" erauso et al. 1993]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YK5 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1YK5 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1yk5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YK5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YK5 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1yk4|1yk4]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rub ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29292 "Pyrococcus abyssi" Erauso et al. 1993])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yk5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yk5 OCA], [https://pdbe.org/1yk5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yk5 RCSB], [https://www.ebi.ac.uk/pdbsum/1yk5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yk5 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1yk5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yk5 OCA], [http://pdbe.org/1yk5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yk5 RCSB], [http://www.ebi.ac.uk/pdbsum/1yk5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1yk5 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/RUBR_PYRAB RUBR_PYRAB]] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule (By similarity).
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[https://www.uniprot.org/uniprot/RUBR_PYRAB RUBR_PYRAB] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</div>
</div>
<div class="pdbe-citations 1yk5" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1yk5" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Rubredoxin 3D structures|Rubredoxin 3D structures]]
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*[[Rubredoxin PDB structures|Rubredoxin PDB structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Pyrococcus abyssi erauso et al. 1993]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Bianco, P]]
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[[Category: Pyrococcus abyssi]]
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[[Category: Bonisch, H]]
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[[Category: Bianco P]]
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[[Category: Ladenstein, R]]
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[[Category: Bonisch H]]
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[[Category: Schmidt, C L]]
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[[Category: Ladenstein R]]
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[[Category: Electron transport]]
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[[Category: Schmidt CL]]

Current revision

Pyrococcus abyssi rubredoxin

PDB ID 1yk5

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