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1ynr

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==Crystal structure of the cytochrome c-552 from Hydrogenobacter thermophilus at 2.0 resolution==
==Crystal structure of the cytochrome c-552 from Hydrogenobacter thermophilus at 2.0 resolution==
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<StructureSection load='1ynr' size='340' side='right' caption='[[1ynr]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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<StructureSection load='1ynr' size='340' side='right'caption='[[1ynr]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1ynr]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Dsm_6534 Dsm 6534]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YNR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YNR FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1ynr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Hydrogenobacter_thermophilus Hydrogenobacter thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YNR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YNR FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ayg|1ayg]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ynr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ynr OCA], [http://pdbe.org/1ynr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ynr RCSB], [http://www.ebi.ac.uk/pdbsum/1ynr PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ynr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ynr OCA], [https://pdbe.org/1ynr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ynr RCSB], [https://www.ebi.ac.uk/pdbsum/1ynr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ynr ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/CY552_HYDTT CY552_HYDTT]] Reacts with hydrogenase.
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[https://www.uniprot.org/uniprot/CY552_HYDTT CY552_HYDTT] Reacts with hydrogenase.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yn/1ynr_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yn/1ynr_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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==See Also==
==See Also==
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*[[Nitric reductase|Nitric reductase]]
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*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Dsm 6534]]
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[[Category: Hydrogenobacter thermophilus]]
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[[Category: Bonivento, D]]
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[[Category: Large Structures]]
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[[Category: Borgia, A]]
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[[Category: Bonivento D]]
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[[Category: Bren, K L]]
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[[Category: Borgia A]]
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[[Category: Brunori, M]]
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[[Category: Bren KL]]
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[[Category: Cutruzzola, F]]
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[[Category: Brunori M]]
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[[Category: Dubey, V K]]
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[[Category: Cutruzzola F]]
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[[Category: Gianni, S]]
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[[Category: Di Matteo A]]
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[[Category: Matteo, A Di]]
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[[Category: Dubey VK]]
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[[Category: Travaglini-Allocatelli, C]]
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[[Category: Gianni S]]
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[[Category: Electron transport]]
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[[Category: Travaglini-Allocatelli C]]
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[[Category: Helix]]
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Current revision

Crystal structure of the cytochrome c-552 from Hydrogenobacter thermophilus at 2.0 resolution

PDB ID 1ynr

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