This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1yph

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:12, 25 October 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1yph.png|left|200px]]
 
-
{{STRUCTURE_1yph| PDB=1yph | SCENE= }}
+
==High resolution structure of bovine alpha-chymotrypsin==
-
 
+
<StructureSection load='1yph' size='340' side='right'caption='[[1yph]], [[Resolution|resolution]] 1.34&Aring;' scene=''>
-
===High resolution structure of bovine alpha-chymotrypsin===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1yph]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YPH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YPH FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_019281249}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.34&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yph FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yph OCA], [https://pdbe.org/1yph PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yph RCSB], [https://www.ebi.ac.uk/pdbsum/1yph PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yph ProSAT]</span></td></tr>
-
[[1yph]] is a 6 chain structure of [[Chymotrypsin]] with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YPH OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CTRA_BOVIN CTRA_BOVIN]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yp/1yph_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yph ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Chymotrypsin|Chymotrypsin]]
+
*[[Chymotrypsin 3D structures|Chymotrypsin 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:019281249</ref><references group="xtra"/>
+
[[Category: Bos taurus]]
[[Category: Bos taurus]]
-
[[Category: Chymotrypsin]]
+
[[Category: Large Structures]]
-
[[Category: Galunsky, B.]]
+
[[Category: Galunsky B]]
-
[[Category: Kasche, V.]]
+
[[Category: Kasche V]]
-
[[Category: Lamzin, V S.]]
+
[[Category: Lamzin VS]]
-
[[Category: Razeto, A.]]
+
[[Category: Razeto A]]
-
[[Category: Wilson, K S.]]
+
[[Category: Wilson KS]]
-
[[Category: Hydrolase]]
+
-
[[Category: Serine protease]]
+

Current revision

High resolution structure of bovine alpha-chymotrypsin

PDB ID 1yph

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools