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2dio

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==Crystal Structure of the Allene Oxide Cyclase 2 with bound inhibitor vernolic acid==
==Crystal Structure of the Allene Oxide Cyclase 2 with bound inhibitor vernolic acid==
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<StructureSection load='2dio' size='340' side='right' caption='[[2dio]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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<StructureSection load='2dio' size='340' side='right'caption='[[2dio]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2dio]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DIO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DIO FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2dio]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DIO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DIO FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EOD:11-[(2R,3S)-3-PENTYLOXIRAN-2-YL]UNDECANOIC+ACID'>EOD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EOD:11-[(2R,3S)-3-PENTYLOXIRAN-2-YL]UNDECANOIC+ACID'>EOD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2brj|2brj]], [[2gin|2gin]], [[1z8k|1z8k]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dio OCA], [https://pdbe.org/2dio PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dio RCSB], [https://www.ebi.ac.uk/pdbsum/2dio PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dio ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AT3G25770 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Allene-oxide_cyclase Allene-oxide cyclase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.99.6 5.3.99.6] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dio OCA], [http://pdbe.org/2dio PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dio RCSB], [http://www.ebi.ac.uk/pdbsum/2dio PDBsum]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/AOC2_ARATH AOC2_ARATH]] Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid.
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[https://www.uniprot.org/uniprot/AOC2_ARATH AOC2_ARATH] Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/di/2dio_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/di/2dio_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Allene-oxide cyclase]]
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[[Category: Arabidopsis thaliana]]
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[[Category: Arath]]
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[[Category: Large Structures]]
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[[Category: Hofmann, E]]
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[[Category: Hofmann E]]
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[[Category: Schaller, F]]
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[[Category: Schaller F]]
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[[Category: Zerbe, P]]
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[[Category: Zerbe P]]
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[[Category: Beta barrel]]
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[[Category: Inhibitor complex]]
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[[Category: Isomerase]]
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Current revision

Crystal Structure of the Allene Oxide Cyclase 2 with bound inhibitor vernolic acid

PDB ID 2dio

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