This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2gnu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:49, 25 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2gnu' size='340' side='right'caption='[[2gnu]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='2gnu' size='340' side='right'caption='[[2gnu]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2gnu]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GNU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GNU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2gnu]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides Cereibacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GNU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GNU FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=BPH:BACTERIOPHEOPHYTIN+A'>BPH</scene>, <scene name='pdbligand=CDL:CARDIOLIPIN'>CDL</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=U10:UBIQUINONE-10'>U10</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ogv|1ogv]], [[2bnp|2bnp]], [[2bns|2bns]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=BPH:BACTERIOPHEOPHYTIN+A'>BPH</scene>, <scene name='pdbligand=CDL:CARDIOLIPIN'>CDL</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=U10:UBIQUINONE-10'>U10</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gnu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gnu OCA], [https://pdbe.org/2gnu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gnu RCSB], [https://www.ebi.ac.uk/pdbsum/2gnu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gnu ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gnu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gnu OCA], [https://pdbe.org/2gnu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gnu RCSB], [https://www.ebi.ac.uk/pdbsum/2gnu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gnu ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/RCEH_RHOSH RCEH_RHOSH]] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. [[https://www.uniprot.org/uniprot/RCEM_RHOSH RCEM_RHOSH]] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. [[https://www.uniprot.org/uniprot/RCEL_RHOSH RCEL_RHOSH]] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
+
[https://www.uniprot.org/uniprot/RCEL_CERSP RCEL_CERSP] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 33: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Cereibacter sphaeroides]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Rhodobacter sphaeroides]]
+
[[Category: Cogdell RJ]]
-
[[Category: Cogdell, R J]]
+
[[Category: Engstroem S]]
-
[[Category: Engstroem, S]]
+
[[Category: Gardiner AT]]
-
[[Category: Gardiner, A T]]
+
[[Category: Katona G]]
-
[[Category: Katona, G]]
+
[[Category: Neutze R]]
-
[[Category: Neutze, R]]
+
[[Category: Snijder A]]
-
[[Category: Snijder, A]]
+
[[Category: Wadsten P]]
-
[[Category: Wadsten, P]]
+
[[Category: Woehri AB]]
-
[[Category: Woehri, A B]]
+
-
[[Category: Photosynthesis]]
+
-
[[Category: Reaction centre]]
+
-
[[Category: Ubiquinone b]]
+

Current revision

The crystallization of reaction center from Rhodobacter sphaeroides occurs via a new route

PDB ID 2gnu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools