This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2if0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:53, 25 October 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='2if0' size='340' side='right'caption='[[2if0]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
<StructureSection load='2if0' size='340' side='right'caption='[[2if0]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2if0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IF0 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2IF0 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2if0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IF0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IF0 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2iey|2iey]], [[2iez|2iez]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Small_monomeric_GTPase Small monomeric GTPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.5.2 3.6.5.2] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2if0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2if0 OCA], [https://pdbe.org/2if0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2if0 RCSB], [https://www.ebi.ac.uk/pdbsum/2if0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2if0 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2if0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2if0 OCA], [http://pdbe.org/2if0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2if0 RCSB], [http://www.ebi.ac.uk/pdbsum/2if0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2if0 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RB27B_MOUSE RB27B_MOUSE]] May be involved in targeting uroplakins to urothelial apical membranes (By similarity).
+
[https://www.uniprot.org/uniprot/RB27B_MOUSE RB27B_MOUSE] May be involved in targeting uroplakins to urothelial apical membranes (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 30: Line 29:
</div>
</div>
<div class="pdbe-citations 2if0" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 2if0" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Ras-related protein Rab 3D structures|Ras-related protein Rab 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 35: Line 37:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lk3 transgenic mice]]
+
[[Category: Mus musculus]]
-
[[Category: Small monomeric GTPase]]
+
[[Category: Chavas LMG]]
-
[[Category: Chavas, L M.G]]
+
[[Category: Ihara K]]
-
[[Category: Ihara, K]]
+
[[Category: Izumi T]]
-
[[Category: Izumi, T]]
+
[[Category: Kamikubo H]]
-
[[Category: Kamikubo, H]]
+
[[Category: Kataoka M]]
-
[[Category: Kataoka, M]]
+
[[Category: Kato R]]
-
[[Category: Kato, R]]
+
[[Category: Kawasaki M]]
-
[[Category: Kawasaki, M]]
+
[[Category: Torii S]]
-
[[Category: Torii, S]]
+
[[Category: Wakatsuki S]]
-
[[Category: Wakatsuki, S]]
+
-
[[Category: Gdp]]
+
-
[[Category: Gtpase]]
+
-
[[Category: Rab]]
+
-
[[Category: Rab27]]
+
-
[[Category: Signaling protein]]
+
-
[[Category: Swapping]]
+

Current revision

Crystal Structure of mouse Rab27b bound to GDP in monoclinic space group

PDB ID 2if0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools