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2ikc
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2ikc" size="350" color="white" frame="true" align="right" spinBox="true" caption="2ikc, resolution 3.25Å" /> '''Crystal structure of...) |
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| - | [[Image:2ikc.gif|left|200px]]<br /><applet load="2ikc" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2ikc, resolution 3.25Å" /> | ||
| - | '''Crystal structure of sheep lactoperoxidase at 3.25 A resolution reveals the binding sites for formate'''<br /> | ||
| - | == | + | ==Crystal structure of sheep lactoperoxidase at 3.25 A resolution reveals the binding sites for formate== |
| - | + | <StructureSection load='2ikc' size='340' side='right'caption='[[2ikc]], [[Resolution|resolution]] 3.25Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [ | + | <table><tr><td colspan='2'>[[2ikc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ovis_aries Ovis aries]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IKC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IKC FirstGlance]. <br> |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.25Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ikc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ikc OCA], [https://pdbe.org/2ikc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ikc RCSB], [https://www.ebi.ac.uk/pdbsum/2ikc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ikc ProSAT]</span></td></tr> | |
| - | [ | + | </table> |
| - | [[ | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ik/2ikc_consurf.spt"</scriptWhenChecked> |
| - | [[ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ikc ConSurf]. | |
| - | + | <div style="clear:both"></div> | |
| - | + | ==See Also== | |
| + | *[[Lactoperoxidase|Lactoperoxidase]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Ovis aries]] | ||
| + | [[Category: Sharma S]] | ||
| + | [[Category: Sheikh IA]] | ||
| + | [[Category: Singh AK]] | ||
| + | [[Category: Singh N]] | ||
| + | [[Category: Singh TP]] | ||
Current revision
Crystal structure of sheep lactoperoxidase at 3.25 A resolution reveals the binding sites for formate
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Categories: Large Structures | Ovis aries | Sharma S | Sheikh IA | Singh AK | Singh N | Singh TP
