This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2olh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:58, 25 October 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2olh.png|left|200px]]
 
-
{{STRUCTURE_2olh| PDB=2olh | SCENE= }}
+
==Crystal structure of a signalling protein (SPG-40) complex with cellobiose at 2.78 A resolution==
-
 
+
<StructureSection load='2olh' size='340' side='right'caption='[[2olh]], [[Resolution|resolution]] 2.78&Aring;' scene=''>
-
===Crystal structure of a signalling protein (SPG-40) complex with cellobiose at 2.78 A resolution===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2olh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OLH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OLH FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.78&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PRD_900005:beta-cellobiose'>PRD_900005</scene></td></tr>
-
[[2olh]] is a 1 chain structure of [[Chitinase-3-like protein 1]] with sequence from [http://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OLH OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2olh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2olh OCA], [https://pdbe.org/2olh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2olh RCSB], [https://www.ebi.ac.uk/pdbsum/2olh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2olh ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CH3L1_CAPHI CH3L1_CAPHI] Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ol/2olh_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2olh ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Chitinase-3-like protein 1|Chitinase-3-like protein 1]]
+
*[[Chitinase-3-like protein 3D structures|Chitinase-3-like protein 3D structures]]
 +
*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
 +
__TOC__
 +
</StructureSection>
[[Category: Capra hircus]]
[[Category: Capra hircus]]
-
[[Category: Bhushan, A.]]
+
[[Category: Large Structures]]
-
[[Category: Kaur, P.]]
+
[[Category: Bhushan A]]
-
[[Category: Sharma, P.]]
+
[[Category: Kaur P]]
-
[[Category: Sharma, S.]]
+
[[Category: Sharma P]]
-
[[Category: Singh, N.]]
+
[[Category: Sharma S]]
-
[[Category: Singh, T P.]]
+
[[Category: Singh N]]
-
[[Category: Complex]]
+
[[Category: Singh TP]]
-
[[Category: Signaling protein]]
+
-
[[Category: Sugar]]
+

Current revision

Crystal structure of a signalling protein (SPG-40) complex with cellobiose at 2.78 A resolution

PDB ID 2olh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools