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2yvw

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(New page: 200px<br /><applet load="2yvw" size="350" color="white" frame="true" align="right" spinBox="true" caption="2yvw, resolution 1.81&Aring;" /> '''Crystal structure of...)
Current revision (09:06, 25 October 2023) (edit) (undo)
 
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[[Image:2yvw.gif|left|200px]]<br /><applet load="2yvw" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="2yvw, resolution 1.81&Aring;" />
 
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'''Crystal structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Aquifex aeolicus VF5'''<br />
 
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==About this Structure==
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==Crystal structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Aquifex aeolicus VF5==
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2YVW is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus] with <scene name='pdbligand=PO4:'>PO4</scene> and <scene name='pdbligand=EPU:'>EPU</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/UDP-N-acetylglucosamine_1-carboxyvinyltransferase UDP-N-acetylglucosamine 1-carboxyvinyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.7 2.5.1.7] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YVW OCA].
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<StructureSection load='2yvw' size='340' side='right'caption='[[2yvw]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
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[[Category: Aquifex aeolicus]]
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== Structural highlights ==
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[[Category: Single protein]]
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<table><tr><td colspan='2'>[[2yvw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YVW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YVW FirstGlance]. <br>
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[[Category: UDP-N-acetylglucosamine 1-carboxyvinyltransferase]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.81&#8491;</td></tr>
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[[Category: Kitamuta, Y.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPU:URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL)+BUTYRIC+ACID'>EPU</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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[[Category: Kuramitsu, S.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yvw OCA], [https://pdbe.org/2yvw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yvw RCSB], [https://www.ebi.ac.uk/pdbsum/2yvw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yvw ProSAT], [https://www.topsan.org/Proteins/RSGI/2yvw TOPSAN]</span></td></tr>
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[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
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</table>
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[[Category: Yokoyama, S.]]
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== Function ==
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[[Category: EPU]]
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[https://www.uniprot.org/uniprot/MURA_AQUAE MURA_AQUAE] Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine (By similarity).
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[[Category: PO4]]
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== Evolutionary Conservation ==
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[[Category: national project on protein structural and functional analyses]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: nppsfa]]
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Check<jmol>
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[[Category: peptidoglycan]]
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<jmolCheckbox>
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[[Category: riken structural genomics/proteomics initiative]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yv/2yvw_consurf.spt"</scriptWhenChecked>
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[[Category: rsgi]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: structural genomics]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: transferase]]
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</jmolCheckbox>
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[[Category: udp-n-acetylglucosamine]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yvw ConSurf].
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<div style="clear:both"></div>
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 12:55:12 2008''
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==See Also==
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*[[Enoylpyruvate transferase 3D structures|Enoylpyruvate transferase 3D structures]]
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__TOC__
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</StructureSection>
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[[Category: Aquifex aeolicus VF5]]
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[[Category: Large Structures]]
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[[Category: Kitamuta Y]]
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[[Category: Kuramitsu S]]
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[[Category: Yokoyama S]]

Current revision

Crystal structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Aquifex aeolicus VF5

PDB ID 2yvw

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