This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2yyb
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of TTHA1606 from Thermus thermophilus HB8== | ==Crystal structure of TTHA1606 from Thermus thermophilus HB8== | ||
| - | <StructureSection load='2yyb' size='340' side='right' caption='[[2yyb]], [[Resolution|resolution]] 2.60Å' scene=''> | + | <StructureSection load='2yyb' size='340' side='right'caption='[[2yyb]], [[Resolution|resolution]] 2.60Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2yyb]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2yyb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YYB FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yyb OCA], [https://pdbe.org/2yyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yyb RCSB], [https://www.ebi.ac.uk/pdbsum/2yyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yyb ProSAT], [https://www.topsan.org/Proteins/RSGI/2yyb TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/Q5SHX4_THET8 Q5SHX4_THET8] Converts GTP to dihydroneopterin triphosphate (By similarity).[RuleBase:RU004385] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/2yyb_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/2yyb_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 20: | Line 21: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Ebihara | + | [[Category: Thermus thermophilus HB8]] |
| - | [[Category: Kuramitsu | + | [[Category: Ebihara A]] |
| - | [[Category: Masui | + | [[Category: Kuramitsu S]] |
| - | [[Category: Nakagwa | + | [[Category: Masui R]] |
| - | + | [[Category: Nakagwa N]] | |
| - | [[Category: Tomoike | + | [[Category: Tomoike F]] |
| - | [[Category: Yokoyama | + | [[Category: Yokoyama S]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of TTHA1606 from Thermus thermophilus HB8
| |||||||||||
